| Literature DB >> 28615213 |
Francine Z Marques1,2, Priscilla R Prestes1, Sean G Byars3,4,5, Scott C Ritchie3,5, Peter Würtz6, Sheila K Patel7, Scott A Booth1, Indrajeetsinh Rana1, Yosuke Minoda1, Stuart P Berzins1,8, Claire L Curl9, James R Bell9, Bryan Wai7,10, Piyush M Srivastava7,10, Antti J Kangas6, Pasi Soininen6,11, Saku Ruohonen12, Mika Kähönen13, Terho Lehtimäki14, Emma Raitoharju14, Aki Havulinna15, Markus Perola15,16, Olli Raitakari12,17, Veikko Salomaa15, Mika Ala-Korpela6,11,18,19, Johannes Kettunen6,11,15, Maree McGlynn20, Jason Kelly1, Mary E Wlodek7, Paul A Lewandowski20, Lea M Delbridge9, Louise M Burrell7,10, Michael Inouye2,3,4,5,9, Stephen B Harrap9, Fadi J Charchar21,9,22.
Abstract
BACKGROUND: Cardiac hypertrophy increases the risk of developing heart failure and cardiovascular death. The neutrophil inflammatory protein, lipocalin-2 (LCN2/NGAL), is elevated in certain forms of cardiac hypertrophy and acute heart failure. However, a specific role for LCN2 in predisposition and etiology of hypertrophy and the relevant genetic determinants are unclear. Here, we defined the role of LCN2 in concentric cardiac hypertrophy in terms of pathophysiology, inflammatory expression networks, and genomic determinants. METHODS ANDEntities:
Keywords: C‐reactive protein; GlycA; NGAL; concentric hypertrophy; gene coexpression networks; hypertrophy; lipocalin‐2; systems biology
Mesh:
Substances:
Year: 2017 PMID: 28615213 PMCID: PMC5669193 DOI: 10.1161/JAHA.117.005971
Source DB: PubMed Journal: J Am Heart Assoc ISSN: 2047-9980 Impact factor: 5.501
Figure 1Overexpression of lipocalin‐2 (Lcn2) in a polygenic model of cardiac hypertrophy. A, Relative expression levels of Lcn2 mRNA measured by real‐time PCR in the heart of 2‐day‐old hypertrophic heart rat (HHR; n=10) compared to normal heart rat (NHR; n=8; P<0.0001), (B) 13‐week‐old (P=0.016; n=9/strain), 35‐week‐old (P<0.001; n=8 NHR and n=11 HHR), and 50‐week old (P=0.0015; n=8 NHR and n=11 HHR) HHR compared to NHR. Heart Lcn2 (25‐kDa monomer) protein is significantly higher in the HHR compared with NHR, measured by both (C) western blot (P=0.039; n=3/strain) and (D) ELISA (P=0.029; n=4/strain). E, Rat plasma Lcn2 in 35‐week‐old (P=0.0009; n=6/strain) and (F) 2‐day‐old (P<0.0001; n=5/strain) HHR compared to NHR. G, Lcn2 mRNA in cardiomyocytes (P=0.013; n=4/strain) and noncardiomyocytes (P=0.03) in the NHR and HHR. The interaction explained 5.135% of total variation (P=0.138), the cell type 6.91% of variation (P=0.0899), and the strain explained the majority of variation (63.58%; P=0.0001). H, Lcn2 staining in NHR and HHR hearts (×400 magnification; scale bar=200μm). *P<0.05; **P<0.01; ***P<0.001. Data shown as mean and error bars represent SEM.
Figure 2Variants in the lipocalin‐2 (Lcn2) gene, showing regions with variants in the HHR, according to the Rat Genome Database (RGD; version 5). A, Genotype analysis of the region of 10 000 bp around the Lcn2 gene, showing the origin of the variants observed in the HHR. Highlighted in gray are variants that differ from the reference genome, showing that the HHR carries 3 unique variants which were inherited from the SHR. B, Single‐nucleotide polymorphism (SNP) on chr3: 16 767 791 (rs196968512 C/T) 1401 bp upstream of Lcn2 gene. C, SNP on chr3: 16 767 398 (G/A) in a highly conserved region 1001 bp upstream the Lcn2 gene. D, Nonfunctional intronic SNP originally from SHR on position chr3: 16 763 494 (rs198262931 C/T). E, Lcn2 pre‐mRNA is also upregulated in the HHR compared to the NHR (n=5/strain), suggesting that it is dysregulated at the transcriptional level. F, The SNP, rs196968512, creates a new binding site for the transcription factor, Rora (region underlined in B), which acts as an enhancer for expression of Lcn2 and is exclusive of the HHR. The figure shows the binding site score and the P values for the binding of Rora to that region. chr3 indicates rat chromosome 3; F344, Fisher 344 rat; HHR, hypertrophic heart rat; N/A, nonannotated SNP; NHR, normal heart rat; RGD, reference sequence from the Rat Genome Database v5; SHR, spontaneously hypertensive rat.
Figure 3Heart size and associated pathways in lipocalin‐2 (Lcn2)‐knockout (KO) mice. A, Adult Lcn2‐knockout mice have smaller hearts (*P=0.033; n=4 wild‐type and n=6 Lcn2 KO). Data shown as mean and error bars represent standard error of mean. B, Genes and pathways differentially regulated in the heart of Lcn2‐knockout. Hypertrophic cardiomyopathy (KEGG mmu05410, P=0.0007) is shown in red, dilated cardiomyopathy in blue (Kyoto Encyclopedia of Genes and Genomes [KEGG] mmu05412; P=0.008) and arrhythmogenic right ventricular cardiomyopathy in yellow (KEGG mmu05412; P=0.0003). The genes of dilated cardiomyopathy and hypertrophic cardiomyopathy pathways were the same, and therefore lines are overlapped. Each edge point indicates the chromosomal location for genes identified in specific pathways from the differentially expressed genes. Bar plots are the differentially expressed genes in each pathway. Red depicts genes upregulated, and blue those downregulated, represented as log2 fold change. C, Gene ontology analysis, showing −log P value. ABC indicates ATP‐binding cassette; ECM extracellular matrix.
Figure 4Environmental model of cardiac hypertrophy overexpresses lipocalin‐2 (Lcn2) mRNA (*P=0.0214; n=16 sham and 9 restricted mice). Data shown as mean and error bars represent SEM.
Figure 5Role of lipocalin‐2 (Lcn2) in cardiac cells. A, Representation of wheat‐germ agglutinin (red) and DAPI (blue) staining, used to estimate cell size (×400 magnification; scale bar=60 μm). Overexpression of Lcn2 increased the size of the cells when compared with cells transfected with the empty plasmid (P<0.0001). B, Overexpression of Lcn2 reduced the number of cells measured by hemocytometer (P=0.0052). C, Overexpression of Lcn2 resulted in cell‐cycle arrest, observed by reduced phosphorylation of histone H3 (pH3; ×200 magnification; scale bar=100 μm; P<0.0001). D, Genes and pathways differentially regulated with overexpression of Lcn2. Cell cycle (Kyoto Encyclopedia of Genes and Genomes [KEGG] rno04110; P=0.006) is shown in green, hypertrophic cardiomyopathy (KEGG rno05410, P=0.07) in red, and dilated cardiomyopathy (KEGG rno05414; P=0.09) in blue. Genes of dilated cardiomyopathy and hypertrophic cardiomyopathy pathways were the same, and therefore lines overlapped. Each edge point indicates the chromosomal location for genes identified in specific pathways from the differentially expressed genes. Bar plots are the differentially expressed genes in each pathway. Red depicts genes upregulated, and blue those downregulated, represented as log2 fold change. E, Gene ontology analysis, showing −log P value. All experiments were run in 3 independent experiments, with at least 3 replicates each (total, 9 replicates). For experiments involving confocal microscopy, 10 different fields were analyzed per replicate. Positive controls were added to all experiments. **P<0.01; ***P<0.001. Data shown as mean and error bars represent SEM.
Figure 6Lipocalin‐2 (LCN2) is associated with human cardiac hypertrophy. A, Plasma levels of LCN2 were higher in patients with echocardiographically determined left ventricular hypertrophy (n=30) compared with those without (n=84; P=0.017, showing the median and 95% CI). B, There was a positive correlation between LCN2 levels and left ventricular mass (n=114; Spearman's r=0.22; P=0.018). C, LCN2 was overexpressed in human idiopathic dilated hearts compared with normal hearts (P=0.008 after adjustment for false discovery rate). Data shown as mean and error bars represent SEM. *P<0.05; **P<0.01.
Figure 7Neutrophil module: An inflammatory biomarker associated coexpression network is under genetic control of a cis‐eQTL of lipocalin‐2 (). A, coexpression heatmap (Spearman's correlation) and scaled network connectivity (Methods) of genes composing the neutrophil module in the YFS (n=1650). B, Box plots of age‐ and sex‐adjusted expression in individuals with differing dosages of the rs13297295 minor allele (“C”). C, Locus zoom plot of the 1‐MB region around showing association on the y‐axis (−log10 P value) between each single‐nucleotide polymorphism (points) and expression, recombination rate in the EUR population in that region (blue line underneath the points), and r 2 between each SNP and rs13297295 (point color).
Figure 8Diagram showing summary of findings. LCN2 indicates lipocalin‐2; SNP, single‐nucleotide polymorphism.