Literature DB >> 28614633

Differential sensitivity of total and active soil microbial communities to drought and forest management.

Felipe Bastida1, Irene F Torres1, Manuela Andrés-Abellán2, Petr Baldrian3, Rubén López-Mondéjar3, Tomáš Větrovský3, Hans H Richnow4, Robert Starke5, Sara Ondoño1, Carlos García1, Francisco R López-Serrano2, Nico Jehmlich5.   

Abstract

Climate change will affect semiarid ecosystems through severe droughts that increase the competition for resources in plant and microbial communities. In these habitats, adaptations to climate change may consist of thinning-that reduces competition for resources through a decrease in tree density and the promotion of plant survival. We deciphered the functional and phylogenetic responses of the microbial community to 6 years of drought induced by rainfall exclusion and how forest management affects its resistance to drought, in a semiarid forest ecosystem dominated by Pinus halepensis Mill. A multiOMIC approach was applied to reveal novel, community-based strategies in the face of climate change. The diversity and the composition of the total and active soil microbiome were evaluated by 16S rRNA gene (bacteria) and ITS (fungal) sequencing, and by metaproteomics. The microbial biomass was analyzed by phospholipid fatty acids (PLFAs), and the microbially mediated ecosystem multifunctionality was studied by the integration of soil enzyme activities related to the cycles of C, N, and P. The microbial biomass and ecosystem multifunctionality decreased in drought-plots, as a consequence of the lower soil moisture and poorer plant development, but this decrease was more notable in unthinned plots. The structure and diversity of the total bacterial community was unaffected by drought at phylum and order level, but did so at genus level, and was influenced by seasonality. However, the total fungal community and the active microbial community were more sensitive to drought and were related to ecosystem multifunctionality. Thinning in plots without drought increased the active diversity while the total diversity was not affected. Thinning promoted the resistance of ecosystem multifunctionality to drought through changes in the active microbial community. The integration of total and active microbiome analyses avoids misinterpretations of the links between the soil microbial community and climate change.
© 2017 John Wiley & Sons Ltd.

Entities:  

Keywords:  climate change; drought; forest management; genomics; metaproteomics; microbial biomass; microbial community; semiarid

Mesh:

Substances:

Year:  2017        PMID: 28614633     DOI: 10.1111/gcb.13790

Source DB:  PubMed          Journal:  Glob Chang Biol        ISSN: 1354-1013            Impact factor:   10.863


  17 in total

1.  Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species.

Authors:  Jiantong Liu; Xinyu Wang; Lin Liu; Xuefeng Wu; Zhichao Xia; Qingxue Guo
Journal:  Ecol Evol       Date:  2022-07-13       Impact factor: 3.167

2.  Incomplete cell disruption of resistant microbes.

Authors:  Robert Starke; Nico Jehmlich; Trinidad Alfaro; Alice Dohnalkova; Petr Capek; Sheryl L Bell; Kirsten S Hofmockel
Journal:  Sci Rep       Date:  2019-04-04       Impact factor: 4.379

3.  Conventional and organic soil management as divergent drivers of resident and active fractions of major soil food web constituents.

Authors:  Paula Harkes; Afnan K A Suleiman; Sven J J van den Elsen; Johannes J de Haan; Martijn Holterman; Eiko E Kuramae; Johannes Helder
Journal:  Sci Rep       Date:  2019-09-18       Impact factor: 4.379

4.  Spatial patterns in soil physicochemical and microbiological properties in a grassland adjacent to a newly built lake.

Authors:  Jinsheng Li; Chan An; Jianying Shang; Tianchi Zhao; Qian Zhang; Xiaomeng Yang; Cheng Ren; Ding Huang; Kesi Liu; Xinqing Shao
Journal:  Microbiologyopen       Date:  2019-08-31       Impact factor: 3.139

Review 5.  Soil Metaproteomics for the Study of the Relationships Between Microorganisms and Plants: A Review of Extraction Protocols and Ecological Insights.

Authors:  Maria Tartaglia; Felipe Bastida; Rosaria Sciarrillo; Carmine Guarino
Journal:  Int J Mol Sci       Date:  2020-11-11       Impact factor: 5.923

6.  Resource Availability Drives Responses of Soil Microbial Communities to Short-term Precipitation and Nitrogen Addition in a Desert Shrubland.

Authors:  Weiwei She; Yuxuan Bai; Yuqing Zhang; Shugao Qin; Wei Feng; Yanfei Sun; Jing Zheng; Bin Wu
Journal:  Front Microbiol       Date:  2018-02-09       Impact factor: 5.640

7.  Ecological and functional adaptations to water management in a semiarid agroecosystem: a soil metaproteomics approach.

Authors:  Robert Starke; Felipe Bastida; Joaquín Abadía; Carlos García; Emilio Nicolás; Nico Jehmlich
Journal:  Sci Rep       Date:  2017-08-31       Impact factor: 4.379

8.  Sludge Biochar Amendment and Alfalfa Revegetation Improve Soil Physicochemical Properties and Increase Diversity of Soil Microbes in Soils from a Rare Earth Element Mining Wasteland.

Authors:  Caigui Luo; Yangwu Deng; Kazuyuki Inubushi; Jian Liang; Sipin Zhu; Zhenya Wei; Xiaobin Guo; Xianping Luo
Journal:  Int J Environ Res Public Health       Date:  2018-05-11       Impact factor: 3.390

9.  Phylogenetic conservation of soil bacterial responses to simulated global changes.

Authors:  Kazuo Isobe; Nicholas J Bouskill; Eoin L Brodie; Erika A Sudderth; Jennifer B H Martiny
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-03-23       Impact factor: 6.237

10.  Nitrogen Fertilizer Amendment Alter the Bacterial Community Structure in the Rhizosphere of Rice (Oryza sativa L.) and Improve Crop Yield.

Authors:  Jun Chen; Yasir Arafat; Israr Ud Din; Bo Yang; Liuting Zhou; Juanying Wang; Puleng Letuma; Hongmiao Wu; Xianjin Qin; Linkun Wu; Sheng Lin; Zhixing Zhang; Wenxiong Lin
Journal:  Front Microbiol       Date:  2019-11-14       Impact factor: 5.640

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