Literature DB >> 28611063

Global proteomic analysis of advanced glycation end products in the Arabidopsis proteome provides evidence for age-related glycation hot spots.

Tatiana Bilova1,2,3, Gagan Paudel4,2, Nikita Shilyaev5, Rico Schmidt6, Dominic Brauch2,7, Elena Tarakhovskaya3, Svetlana Milrud3,5, Galina Smolikova3, Alain Tissier8, Thomas Vogt8, Andrea Sinz6, Wolfgang Brandt4, Claudia Birkemeyer2, Ludger A Wessjohann4, Andrej Frolov9,2.   

Abstract

Glycation is a post-translational modification resulting from the interaction of protein amino and guanidino groups with carbonyl compounds. Initially, amino groups react with reducing carbohydrates, yielding Amadori and Heyns compounds. Their further degradation results in formation of advanced glycation end products (AGEs), also originating from α-dicarbonyl products of monosaccharide autoxidation and primary metabolism. In mammals, AGEs are continuously formed during the life of the organism, accumulate in tissues, are well-known markers of aging, and impact age-related tissue stiffening and atherosclerotic changes. However, the role of AGEs in age-related molecular alterations in plants is still unknown. To fill this gap, we present here a comprehensive study of the age-related changes in the Arabidopsis thaliana glycated proteome, including the proteins affected and specific glycation sites therein. We also consider the qualitative and quantitative changes in glycation patterns in terms of the general metabolic background, pathways of AGE formation, and the status of plant anti-oxidative/anti-glycative defense. Although the patterns of glycated proteins were only minimally influenced by plant age, the abundance of 96 AGE sites in 71 proteins was significantly affected in an age-dependent manner and clearly indicated the existence of age-related glycation hot spots in the plant proteome. Homology modeling revealed glutamyl and aspartyl residues in close proximity (less than 5 Å) to these sites in three aging-specific and eight differentially glycated proteins, four of which were modified in catalytic domains. Thus, the sites of glycation hot spots might be defined by protein structure that indicates, at least partly, site-specific character of glycation.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Arabidopsis thaliana; advanced glycation end products (AGEs); aging; glycation; homology modeling; hot spots of glycation; metabolomics; oxidative stress; post-translational modification (PTM); proteomics

Mesh:

Substances:

Year:  2017        PMID: 28611063      PMCID: PMC5612108          DOI: 10.1074/jbc.M117.794537

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  66 in total

1.  Growth stage-based phenotypic analysis of Arabidopsis: a model for high throughput functional genomics in plants.

Authors:  D C Boyes; A M Zayed; R Ascenzi; A J McCaskill; N E Hoffman; K R Davis; J Görlach
Journal:  Plant Cell       Date:  2001-07       Impact factor: 11.277

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Authors:  D I Arnon
Journal:  Plant Physiol       Date:  1949-01       Impact factor: 8.340

3.  Unveiling a glycation hot spot in a recombinant humanized monoclonal antibody.

Authors:  Boyan Zhang; Yi Yang; Inn Yuk; Roger Pai; Patrick McKay; Charles Eigenbrot; Mark Dennis; Viswanatham Katta; Kathleen Champion Francissen
Journal:  Anal Chem       Date:  2008-02-29       Impact factor: 6.986

Review 4.  Clinical review: The role of advanced glycation end products in progression and complications of diabetes.

Authors:  Su-Yen Goh; Mark E Cooper
Journal:  J Clin Endocrinol Metab       Date:  2008-01-08       Impact factor: 5.958

5.  Proteome-wide profiling of carbonylated proteins and carbonylation sites in HeLa cells under mild oxidative stress conditions.

Authors:  Ravi Chand Bollineni; Ralf Hoffmann; Maria Fedorova
Journal:  Free Radic Biol Med       Date:  2013-12-07       Impact factor: 7.376

6.  GC-MS Method for the Quantitation of Carbohydrate Intermediates in Glycation Systems.

Authors:  Sanja Milkovska-Stamenova; Rico Schmidt; Andrej Frolov; Claudia Birkemeyer
Journal:  J Agric Food Chem       Date:  2015-06-16       Impact factor: 5.279

7.  Protein modification by methylglyoxal: chemical nature and synthetic mechanism of a major fluorescent adduct.

Authors:  I N Shipanova; M A Glomb; R H Nagaraj
Journal:  Arch Biochem Biophys       Date:  1997-08-01       Impact factor: 4.013

8.  Methylglyoxal modification of protein. Chemical and immunochemical characterization of methylglyoxal-arginine adducts.

Authors:  T Oya; N Hattori; Y Mizuno; S Miyata; S Maeda; T Osawa; K Uchida
Journal:  J Biol Chem       Date:  1999-06-25       Impact factor: 5.157

9.  ORTH/VIM proteins that regulate DNA methylation are functional ubiquitin E3 ligases.

Authors:  Edward Kraft; Magnolia Bostick; Steven E Jacobsen; Judy Callis
Journal:  Plant J       Date:  2008-09-19       Impact factor: 6.417

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Journal:  Nucleic Acids Res       Date:  2014-10-09       Impact factor: 16.971

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Authors:  Jeffrey S Amthor; Arren Bar-Even; Andrew D Hanson; A Harvey Millar; Mark Stitt; Lee J Sweetlove; Stephen D Tyerman
Journal:  Plant Cell       Date:  2019-01-22       Impact factor: 11.277

2.  Comprehensive Analysis of Protein Glycation Reveals Its Potential Impacts on Protein Degradation and Gene Expression in Human Cells.

Authors:  Fangxu Sun; Suttipong Suttapitugsakul; Haopeng Xiao; Ronghu Wu
Journal:  J Am Soc Mass Spectrom       Date:  2019-05-09       Impact factor: 3.109

3.  Protein Carbonylation and Glycation in Legume Nodules.

Authors:  Manuel A Matamoros; Ahyoung Kim; María Peñuelas; Christian Ihling; Eva Griesser; Ralf Hoffmann; Maria Fedorova; Andrej Frolov; Manuel Becana
Journal:  Plant Physiol       Date:  2018-07-03       Impact factor: 8.340

4.  Mapping protein carboxymethylation sites provides insights into their role in proteostasis and cell proliferation.

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5.  Glyoxalase I activity affects Arabidopsis sensitivity to ammonium nutrition.

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Journal:  Plant Cell Rep       Date:  2022-10-15       Impact factor: 4.964

6.  Synergistic sequence contributions bias glycation outcomes.

Authors:  Joseph M McEwen; Sasha Fraser; Alexxandra L Sosa Guir; Jaydev Dave; Rebecca A Scheck
Journal:  Nat Commun       Date:  2021-06-03       Impact factor: 14.919

Review 7.  Maillard Proteomics: Opening New Pages.

Authors:  Alena Soboleva; Rico Schmidt; Maria Vikhnina; Tatiana Grishina; Andrej Frolov
Journal:  Int J Mol Sci       Date:  2017-12-12       Impact factor: 5.923

Review 8.  Probing Protein Glycation by Chromatography and Mass Spectrometry: Analysis of Glycation Adducts.

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Journal:  Int J Mol Sci       Date:  2017-11-28       Impact factor: 5.923

Review 9.  Carbonylation of proteins-an element of plant ageing.

Authors:  K Ciacka; M Tymiński; A Gniazdowska; U Krasuska
Journal:  Planta       Date:  2020-07-01       Impact factor: 4.116

10.  Does Protein Glycation Impact on the Drought-Related Changes in Metabolism and Nutritional Properties of Mature Pea (Pisum sativum L.) Seeds?

Authors:  Tatiana Leonova; Veronika Popova; Alexander Tsarev; Christian Henning; Kristina Antonova; Nadezhda Rogovskaya; Maria Vikhnina; Tim Baldensperger; Alena Soboleva; Ekaterina Dinastia; Mandy Dorn; Olga Shiroglasova; Tatiana Grishina; Gerd U Balcke; Christian Ihling; Galina Smolikova; Sergei Medvedev; Vladimir A Zhukov; Vladimir Babakov; Igor A Tikhonovich; Marcus A Glomb; Tatiana Bilova; Andrej Frolov
Journal:  Int J Mol Sci       Date:  2020-01-15       Impact factor: 5.923

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