Literature DB >> 28608481

Discovery and function of transfer RNA-derived fragments and their role in disease.

Ana Raquel Soares1, Manuel Santos1.   

Abstract

Until recently, transfer RNAs (tRNAs) were thought to function in protein translation only. However, recent findings demonstrate that both pre- and mature tRNAs can undergo endonucleolytic cleavage by different ribonucleases originating different types of small non-coding RNAs, known as tRNA-derived fragments (tRFs). tRFs are classified according to their origin and are implicated in various cellular processes, namely apoptosis, protein synthesis control, and RNA interference. Although their functions are still poorly understood, their mechanisms of action vary according to the tRF sub-type. Several tRFs have been associated with cancer, neurodegenerative disorders, and viral infections and growing evidence shows that they may constitute novel molecular targets for modulating pathological processes. Here, we recapitulate the current knowledge of tRF biology, highlight the known functions and mechanisms of action of the different sub-classes of tRFs and discuss their implications in human disease. WIREs RNA 2017, 8:e1423. doi: 10.1002/wrna.1423 For further resources related to this article, please visit the WIREs website.
© 2017 Wiley Periodicals, Inc.

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Year:  2017        PMID: 28608481     DOI: 10.1002/wrna.1423

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  35 in total

1.  The RNA landscape of the human placenta in health and disease.

Authors:  Gordon C S Smith; D Stephen Charnock-Jones; Sungsam Gong; Francesca Gaccioli; Justyna Dopierala; Ulla Sovio; Emma Cook; Pieter-Jan Volders; Lennart Martens; Paul D W Kirk; Sylvia Richardson
Journal:  Nat Commun       Date:  2021-05-11       Impact factor: 14.919

2.  Differential expression of human tRNA genes drives the abundance of tRNA-derived fragments.

Authors:  Adrian Gabriel Torres; Oscar Reina; Camille Stephan-Otto Attolini; Lluís Ribas de Pouplana
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-08       Impact factor: 11.205

3.  Translation regulation in skin cancer from a tRNA point of view.

Authors:  Katerina Grafanaki; Dimitrios Anastasakis; George Kyriakopoulos; Ilias Skeparnias; Sophia Georgiou; Constantinos Stathopoulos
Journal:  Epigenomics       Date:  2018-12-19       Impact factor: 4.778

4.  Small noncoding RNAs in FSHD2 muscle cells reveal both DUX4- and SMCHD1-specific signatures.

Authors:  Jong-Won Lim; Chao-Jen Wong; Zizhen Yao; Rabi Tawil; Silvère M van der Maarel; Daniel G Miller; Stephen J Tapscott; Galina N Filippova
Journal:  Hum Mol Genet       Date:  2018-08-01       Impact factor: 6.150

5.  Role of the RNA-binding protein La in cancer pathobiology.

Authors:  Gunhild Sommer; Tilman Heise
Journal:  RNA Biol       Date:  2020-07-20       Impact factor: 4.652

6.  Transfer RNA-derived fragment tRF-28-QSZ34KRQ590K in plasma exosomes may be a potential biomarker for atopic dermatitis in pediatric patients.

Authors:  Li Meng; Long Jiang; Jian Chen; Hongjin Ren; Zhiqin Gao; Fei Wu; Yiyang Wen; Lianjuan Yang
Journal:  Exp Ther Med       Date:  2021-03-16       Impact factor: 2.447

7.  PtncRNAdb: plant transfer RNA-derived non-coding RNAs (tncRNAs) database.

Authors:  Shafaque Zahra; Rohan Bhardwaj; Shikha Sharma; Ajeet Singh; Shailesh Kumar
Journal:  3 Biotech       Date:  2022-04-07       Impact factor: 2.893

8.  Clinical diagnostic values of transfer RNA-derived fragment tRF-19-3L7L73JD and its effects on the growth of gastric cancer cells.

Authors:  Yijing Shen; Yaoyao Xie; Xiuchong Yu; Shuangshuang Zhang; Qiuyan Wen; Guoliang Ye; Junming Guo
Journal:  J Cancer       Date:  2021-04-02       Impact factor: 4.207

9.  SMORE: Synteny Modulator of Repetitive Elements.

Authors:  Sarah J Berkemer; Anne Hoffmann; Cameron R A Murray; Peter F Stadler
Journal:  Life (Basel)       Date:  2017-10-31

10.  tRNA derived fragment (tRF)-3009 participates in modulation of IFN-α-induced CD4+ T cell oxidative phosphorylation in lupus patients.

Authors:  Guannan Geng; Huijing Wang; Weiwei Xin; Zhe Liu; Jie Chen; Zhang Danting; Fei Han; Shuang Ye
Journal:  J Transl Med       Date:  2021-07-13       Impact factor: 5.531

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