Literature DB >> 28606901

The Enzyme Activity and Substrate Specificity of Two Major Cinnamyl Alcohol Dehydrogenases in Sorghum (Sorghum bicolor), SbCAD2 and SbCAD4.

Se-Young Jun1, Alexander M Walker2, Hoon Kim3, John Ralph3, Wilfred Vermerris4,5, Scott E Sattler6, ChulHee Kang7,2.   

Abstract

Cinnamyl alcohol dehydrogenase (CAD) catalyzes the final step in monolignol biosynthesis, reducing sinapaldehyde, coniferaldehyde, and p-coumaraldehyde to their corresponding alcohols in an NADPH-dependent manner. Because of its terminal location in monolignol biosynthesis, the variation in substrate specificity and activity of CAD can result in significant changes in overall composition and amount of lignin. Our in-depth characterization of two major CAD isoforms, SbCAD2 (Brown midrib 6 [bmr6]) and SbCAD4, in lignifying tissues of sorghum (Sorghum bicolor), a strategic plant for generating renewable chemicals and fuels, indicates their similarity in both structure and activity to Arabidopsis (Arabidopsis thaliana) CAD5 and Populus tremuloides sinapyl alcohol dehydrogenase, respectively. This first crystal structure of a monocot CAD combined with enzyme kinetic data and a catalytic model supported by site-directed mutagenesis allows full comparison with dicot CADs and elucidates the potential signature sequence for their substrate specificity and activity. The L119W/G301F-SbCAD4 double mutant displayed its substrate preference in the order coniferaldehyde > p-coumaraldehyde > sinapaldehyde, with higher catalytic efficiency than that of both wild-type SbCAD4 and SbCAD2. As SbCAD4 is the only major CAD isoform in bmr6 mutants, replacing SbCAD4 with L119W/G301F-SbCAD4 in bmr6 plants could produce a phenotype that is more amenable to biomass processing.
© 2017 American Society of Plant Biologists. All Rights Reserved.

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Year:  2017        PMID: 28606901      PMCID: PMC5543964          DOI: 10.1104/pp.17.00576

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  61 in total

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Authors:  J KUC; O E NELSON
Journal:  Arch Biochem Biophys       Date:  1964-04       Impact factor: 4.013

2.  Brown midrib2 (Bmr2) encodes the major 4-coumarate:coenzyme A ligase involved in lignin biosynthesis in sorghum (Sorghum bicolor (L.) Moench).

Authors:  Ana Saballos; Scott E Sattler; Emiliano Sanchez; Timothy P Foster; Zhanguo Xin; ChulHee Kang; Jeffrey F Pedersen; Wilfred Vermerris
Journal:  Plant J       Date:  2012-04-04       Impact factor: 6.417

3.  Enzyme dynamics and hydrogen tunnelling in a thermophilic alcohol dehydrogenase.

Authors:  A Kohen; R Cannio; S Bartolucci; J P Klinman
Journal:  Nature       Date:  1999-06-03       Impact factor: 49.962

4.  Elucidation of the structure and reaction mechanism of sorghum hydroxycinnamoyltransferase and its structural relationship to other coenzyme a-dependent transferases and synthases.

Authors:  Alexander M Walker; Robert P Hayes; Buhyun Youn; Wilfred Vermerris; Scott E Sattler; ChulHee Kang
Journal:  Plant Physiol       Date:  2013-04-26       Impact factor: 8.340

5.  Removal of substrate inhibition in a lactate dehydrogenase from human muscle by a single residue change.

Authors:  C M Eszes; R B Sessions; A R Clarke; K M Moreton; J J Holbrook
Journal:  FEBS Lett       Date:  1996-12-16       Impact factor: 4.124

6.  Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass.

Authors:  Chunxiang Fu; Jonathan R Mielenz; Xirong Xiao; Yaxin Ge; Choo Y Hamilton; Miguel Rodriguez; Fang Chen; Marcus Foston; Arthur Ragauskas; Joseph Bouton; Richard A Dixon; Zeng-Yu Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-14       Impact factor: 11.205

7.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  Lignin biosynthesis perturbations affect secondary cell wall composition and saccharification yield in Arabidopsis thaliana.

Authors:  Rebecca Van Acker; Ruben Vanholme; Véronique Storme; Jennifer C Mortimer; Paul Dupree; Wout Boerjan
Journal:  Biotechnol Biofuels       Date:  2013-04-26       Impact factor: 6.040

9.  Applying genotyping (TILLING) and phenotyping analyses to elucidate gene function in a chemically induced sorghum mutant population.

Authors:  Zhanguo Xin; Ming Li Wang; Noelle A Barkley; Gloria Burow; Cleve Franks; Gary Pederson; John Burke
Journal:  BMC Plant Biol       Date:  2008-10-14       Impact factor: 4.215

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Authors:  Thomas C Terwilliger; Ralf W Grosse-Kunstleve; Pavel V Afonine; Nigel W Moriarty; Peter H Zwart; Li Wei Hung; Randy J Read; Paul D Adams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05
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  10 in total

1.  Natural variation in ZmFBL41 confers banded leaf and sheath blight resistance in maize.

Authors:  Ning Li; Bao Lin; Hong Wang; Xiaoming Li; Fangfang Yang; Xinhua Ding; Jianbing Yan; Zhaohui Chu
Journal:  Nat Genet       Date:  2019-09-30       Impact factor: 38.330

2.  Passive membrane transport of lignin-related compounds.

Authors:  Josh V Vermaas; Richard A Dixon; Fang Chen; Shawn D Mansfield; Wout Boerjan; John Ralph; Michael F Crowley; Gregg T Beckham
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-28       Impact factor: 11.205

3.  Identification and Characterization of Cinnamyl Alcohol Dehydrogenase Encoding Genes Involved in Lignin Biosynthesis and Resistance to Verticillium dahliae in Upland Cotton (Gossypium hirsutum L.).

Authors:  Haipeng Li; Shulin Zhang; Yunlei Zhao; Xulong Zhao; Wenfei Xie; Yutao Guo; Yujie Wang; Kun Li; Jinggong Guo; Qian-Hao Zhu; Xuebin Zhang; Kun-Peng Jia; Yuchen Miao
Journal:  Front Plant Sci       Date:  2022-04-28       Impact factor: 6.627

4.  Biochemical and Structural Analysis of Substrate Specificity of a Phenylalanine Ammonia-Lyase.

Authors:  Se-Young Jun; Steven A Sattler; Gabriel S Cortez; Wilfred Vermerris; Scott E Sattler; ChulHee Kang
Journal:  Plant Physiol       Date:  2017-12-01       Impact factor: 8.340

5.  Structure and Function of the Cytochrome P450 Monooxygenase Cinnamate 4-hydroxylase from Sorghum bicolor.

Authors:  Bixia Zhang; Kevin M Lewis; Alejandra Abril; Dmitri R Davydov; Wilfred Vermerris; Scott E Sattler; ChulHee Kang
Journal:  Plant Physiol       Date:  2020-04-24       Impact factor: 8.340

6.  Association of gene expression with syringyl to guaiacyl ratio in sugarcane lignin.

Authors:  K Hodgson-Kratky; V Perlo; A Furtado; H Choudhary; J M Gladden; B A Simmons; F Botha; R J Henry
Journal:  Plant Mol Biol       Date:  2021-03-18       Impact factor: 4.076

7.  Structural Basis for Broad Substrate Selectivity of Alcohol Dehydrogenase YjgB from Escherichia coli.

Authors:  Giang Thu Nguyen; Yeon-Gil Kim; Jae-Woo Ahn; Jeong Ho Chang
Journal:  Molecules       Date:  2020-05-21       Impact factor: 4.411

8.  Comprehensive Analysis of Endogenous Volatile Compounds, Transcriptome, and Enzyme Activity Reveals PmCAD1 Involved in Cinnamyl Alcohol Synthesis in Prunus mume.

Authors:  Tengxun Zhang; Fei Bao; Aiqin Ding; Yongjuan Yang; Tangren Cheng; Jia Wang; Qixiang Zhang
Journal:  Front Plant Sci       Date:  2022-02-18       Impact factor: 5.753

9.  Homo- and Hetero-Dimers of CAD Enzymes Regulate Lignification and Abiotic Stress Response in Moso Bamboo.

Authors:  Naresh Vasupalli; Dan Hou; Rahul Mohan Singh; Hantian Wei; Long-Hai Zou; Kim Yrjälä; Aimin Wu; Xinchun Lin
Journal:  Int J Mol Sci       Date:  2021-11-29       Impact factor: 5.923

10.  Common metabolic networks contribute to carbon sink strength of sorghum internodes: implications for bioenergy improvement.

Authors:  Yin Li; Min Tu; Yaping Feng; Wenqing Wang; Joachim Messing
Journal:  Biotechnol Biofuels       Date:  2019-11-20       Impact factor: 6.040

  10 in total

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