Literature DB >> 28605380

Establishment of a Clinic-based Biorepository.

Sarah E Belden1, Chandana K Uppalapati2, Agnes S Pascual3, McKale R Montgomery3, Kathryn J Leyva2, Elizabeth E Hull4, Richard L Averitte1.   

Abstract

The incidence of skin cancer (e.g., squamous cell carcinoma, basal cell carcinoma, and melanoma) has been increasing over the past several years. It is expected that there will be a parallel demand for cutaneous tumor samples for biomedical research studies. Tissue availability, however, is limited due the cost of establishing a biorepository and the lack of protocols available for obtaining clinical samples that do not interfere with clinical operations. A protocol was established to collect and process cutaneous tumor and associated blood and saliva samples that has minimal impact on routine clinical procedures on the date of a Mohs surgery. Tumor samples are collected and processed from patients undergoing their first layer of Mohs surgery for biopsy-proven cutaneous malignancies by the Mohs histotechnologist. Adjacent normal tissue is collected at the time of surgical closure. Additional samples that may be collected are whole-blood and buccal swabs. By utilizing tissue samples that are normally discarded, a biorepository was generated that offers several key advantages by being based in the clinic versus the laboratory setting. These include a wide range of collected samples; access to de-identified patient records, including pathology reports; and, for the typical donor, access to additional samples during follow-up visits.

Entities:  

Mesh:

Year:  2017        PMID: 28605380      PMCID: PMC5608153          DOI: 10.3791/55583

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  17 in total

Review 1.  Quality assessment and preservation of RNA from biobank tissue specimens: a systematic review.

Authors:  Nicole Joaquim Caixeiro; Ken Lai; Cheok Soon Lee
Journal:  J Clin Pathol       Date:  2015-11-23       Impact factor: 3.411

2.  Optimized methodology for sequential extraction of RNA and protein from small human skin biopsies.

Authors:  Susanne R Berglund; Chad W Schwietert; Angela A Jones; Robin L Stern; Joerg Lehmann; Zelanna Goldberg
Journal:  J Invest Dermatol       Date:  2006-10-12       Impact factor: 8.551

3.  Expression of the p40 isoform of p63 has high specificity for cutaneous sarcomatoid squamous cell carcinoma.

Authors:  Thanh T Ha Lan; Stephanie J T Chen; David P Arps; Douglas R Fullen; Rajiv M Patel; Javed Siddiqui; Shannon Carskadon; Nallasivam Palanisamy; Paul W Harms
Journal:  J Cutan Pathol       Date:  2014-11-03       Impact factor: 1.587

Review 4.  Developments in biospecimen research.

Authors:  Jim Vaught
Journal:  Br Med Bull       Date:  2015-04-24       Impact factor: 4.291

5.  An NCI perspective on creating sustainable biospecimen resources.

Authors:  Jimmie Vaught; Joyce Rogers; Kimberly Myers; Mark David Lim; Nicole Lockhart; Helen Moore; Sherilyn Sawyer; Jeffrey L Furman; Carolyn Compton
Journal:  J Natl Cancer Inst Monogr       Date:  2011

Review 6.  Tools to assess tissue quality.

Authors:  Veronique M Neumeister
Journal:  Clin Biochem       Date:  2014-02-22       Impact factor: 3.281

7.  Development of the ISBER Best Practices for Repositories: Collection, Storage, Retrieval and Distribution of Biological Materials for Research.

Authors:  Lori D Campbell; Fay Betsou; Debra Leiolani Garcia; Judith G Giri; Karen E Pitt; Rebecca S Pugh; Katherine C Sexton; Amy P N Skubitz; Stella B Somiari
Journal:  Biopreserv Biobank       Date:  2012-04       Impact factor: 2.300

8.  Establishing a cancer center data bank and biorepository for multidisciplinary research.

Authors:  Christine B Ambrosone; Mary K Nesline; Warren Davis
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2006-09       Impact factor: 4.254

9.  Epithelial-mesenchymal transition in oral squamous cell carcinoma triggered by transforming growth factor-beta1 is Snail family-dependent and correlates with matrix metalloproteinase-2 and -9 expressions.

Authors:  Bin Qiao; Newell W Johnson; Jin Gao
Journal:  Int J Oncol       Date:  2010-09       Impact factor: 5.650

10.  Complement factor H: a biomarker for progression of cutaneous squamous cell carcinoma.

Authors:  Pilvi M Riihilä; Liisa M Nissinen; Risto Ala-Aho; Markku Kallajoki; Reidar Grénman; Seppo Meri; Sirkku Peltonen; Juha Peltonen; Veli-Matti Kähäri
Journal:  J Invest Dermatol       Date:  2013-08-12       Impact factor: 8.551

View more
  2 in total

1.  Complement Factor H in cSCC: Evidence of a Link Between Sun Exposure and Immunosuppression in Skin Cancer Progression.

Authors:  Ellise M Johnson; Chandana K Uppalapati; Agnes S Pascual; Sarah I Estrada; Richard L Averitte; Kathryn J Leyva; Elizabeth E Hull
Journal:  Front Oncol       Date:  2022-02-10       Impact factor: 6.244

2.  A Hybrid Epithelial to Mesenchymal Transition in Ex Vivo Cutaneous Squamous Cell Carcinoma Tissues.

Authors:  Christopher S Pulford; Chandana K Uppalapati; McKale R Montgomery; Richard L Averitte; Elizabeth E Hull; Kathryn J Leyva
Journal:  Int J Mol Sci       Date:  2022-08-16       Impact factor: 6.208

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.