Literature DB >> 28604817

Correction: MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads.

Thomas Nordahl Petersen, Oksana Lukjancenko, Martin Christen Frølund Thomsen, Maria Maddalena Sperotto, Ole Lund, Frank Møller Aarestrup, Thomas Sicheritz-Pontén.   

Abstract

[This corrects the article DOI: 10.1371/journal.pone.0176469.].

Entities:  

Year:  2017        PMID: 28604817      PMCID: PMC5467888          DOI: 10.1371/journal.pone.0179778

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


The fourth author’s name appears incorrectly in the citation. The correct citation is: Petersen TN, Lukjancenko O, Thomsen MCF, Sperotto MM, Lund O, Møller Aarestrup F, et al. (2017) MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads. PLoS ONE 12(5): e0176469. https://doi.org/10.1371/journal.pone.0176469 There are errors in the last sentence of the fifth paragraph of the Results. The correct sentence is: For the in silico dataset (250bp), six methods performed with no errors i.e. CLARK [19], Kraken, Kraken filtered, MEGAN4 BLASTN, MetaCV [20] and RITA. References 19 and 20 should be: 19. Ounit R, Wanamaker S, Close TJ, Lonardi S. (2015) CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers. BMC Genomics, 16:236. 20. Liu J, Wang H, Yang H, Zhang Y, Wang J, Zhao F, Qi J. (2013) Composition-based classification of short metagenomic sequences elucidates the landscapes of taxonomic and functional enrichment of microorganisms. Nucleic Acids Res., 41, 1–10.
  1 in total

1.  MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads.

Authors:  Thomas Nordahl Petersen; Oksana Lukjancenko; Martin Christen Frølund Thomsen; Maria Maddalena Sperotto; Ole Lund; Frank Møller Aarestrup; Thomas Sicheritz-Pontén
Journal:  PLoS One       Date:  2017-05-03       Impact factor: 3.240

  1 in total

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