Literature DB >> 28603775

CRISPR/Cas9: From Genome Engineering to Cancer Drug Discovery.

Ji Luo1.   

Abstract

Advances in translational research are often driven by new technologies. The advent of microarrays, next-generation sequencing, proteomics and RNA interference (RNAi) have led to breakthroughs in our understanding of the mechanisms of cancer and the discovery of new cancer drug targets. The discovery of the bacterial clustered regularly interspaced palindromic repeat (CRISPR) system and its subsequent adaptation as a tool for mammalian genome engineering has opened up new avenues for functional genomics studies. This review will focus on the utility of CRISPR in the context of cancer drug target discovery.

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Year:  2016        PMID: 28603775      PMCID: PMC5461962          DOI: 10.1016/j.trecan.2016.05.001

Source DB:  PubMed          Journal:  Trends Cancer        ISSN: 2405-8025


  69 in total

1.  Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity.

Authors:  F Ann Ran; Patrick D Hsu; Chie-Yu Lin; Jonathan S Gootenberg; Silvana Konermann; Alexandro E Trevino; David A Scott; Azusa Inoue; Shogo Matoba; Yi Zhang; Feng Zhang
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

2.  Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells.

Authors:  Xuebing Wu; David A Scott; Andrea J Kriz; Anthony C Chiu; Patrick D Hsu; Daniel B Dadon; Albert W Cheng; Alexandro E Trevino; Silvana Konermann; Sidi Chen; Rudolf Jaenisch; Feng Zhang; Phillip A Sharp
Journal:  Nat Biotechnol       Date:  2014-04-20       Impact factor: 54.908

3.  Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease.

Authors:  Seung Woo Cho; Sojung Kim; Jong Min Kim; Jin-Soo Kim
Journal:  Nat Biotechnol       Date:  2013-01-29       Impact factor: 54.908

Review 4.  RNAi screening comes of age: improved techniques and complementary approaches.

Authors:  Stephanie E Mohr; Jennifer A Smith; Caroline E Shamu; Ralph A Neumüller; Norbert Perrimon
Journal:  Nat Rev Mol Cell Biol       Date:  2014-09       Impact factor: 94.444

Review 5.  High-throughput functional genomics using CRISPR-Cas9.

Authors:  Ophir Shalem; Neville E Sanjana; Feng Zhang
Journal:  Nat Rev Genet       Date:  2015-04-09       Impact factor: 53.242

6.  In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy.

Authors:  Christopher E Nelson; Chady H Hakim; David G Ousterout; Pratiksha I Thakore; Eirik A Moreb; Ruth M Castellanos Rivera; Sarina Madhavan; Xiufang Pan; F Ann Ran; Winston X Yan; Aravind Asokan; Feng Zhang; Dongsheng Duan; Charles A Gersbach
Journal:  Science       Date:  2015-12-31       Impact factor: 47.728

7.  Simple and rapid in vivo generation of chromosomal rearrangements using CRISPR/Cas9 technology.

Authors:  Rafael B Blasco; Elif Karaca; Chiara Ambrogio; Taek-Chin Cheong; Emre Karayol; Valerio G Minero; Claudia Voena; Roberto Chiarle
Journal:  Cell Rep       Date:  2014-11-13       Impact factor: 9.423

8.  CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering.

Authors:  Prashant Mali; John Aach; P Benjamin Stranges; Kevin M Esvelt; Mark Moosburner; Sriram Kosuri; Luhan Yang; George M Church
Journal:  Nat Biotechnol       Date:  2013-08-01       Impact factor: 54.908

9.  Targeted genomic rearrangements using CRISPR/Cas technology.

Authors:  Peter S Choi; Matthew Meyerson
Journal:  Nat Commun       Date:  2014-04-24       Impact factor: 14.919

10.  Generation of mouse models of myeloid malignancy with combinatorial genetic lesions using CRISPR-Cas9 genome editing.

Authors:  Dirk Heckl; Monika S Kowalczyk; David Yudovich; Roger Belizaire; Rishi V Puram; Marie E McConkey; Anne Thielke; Jon C Aster; Aviv Regev; Benjamin L Ebert
Journal:  Nat Biotechnol       Date:  2014-06-22       Impact factor: 54.908

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  15 in total

Review 1.  Applications of genome editing technology in the targeted therapy of human diseases: mechanisms, advances and prospects.

Authors:  Hongyi Li; Yang Yang; Weiqi Hong; Mengyuan Huang; Min Wu; Xia Zhao
Journal:  Signal Transduct Target Ther       Date:  2020-01-03

Review 2.  Targeting "undruggable" c-Myc protein by synthetic lethality.

Authors:  Chen Wang; Hui Fang; Jiawei Zhang; Ying Gu
Journal:  Front Med       Date:  2021-03-04       Impact factor: 4.592

3.  A Genome-Wide Screen Identifies PDPK1 as a Target to Enhance the Efficacy of MEK1/2 Inhibitors in NRAS Mutant Melanoma.

Authors:  Mai Q Nguyen; Nicole A Wilski; Timothy J Purwin; Weijia Cai; Mégane Vernon; Manoela Tiago; Andrew E Aplin
Journal:  Cancer Res       Date:  2022-07-18       Impact factor: 13.312

4.  Integrated genome and tissue engineering enables screening of cancer vulnerabilities in physiologically relevant perfusable ex vivo cultures.

Authors:  Michael Hu; Xin Yi Lei; Jon D Larson; Melissa McAlonis; Kyle Ford; Daniella McDonald; Krystal Mach; Jessica M Rusert; Robert J Wechsler-Reya; Prashant Mali
Journal:  Biomaterials       Date:  2021-12-02       Impact factor: 15.304

Review 5.  CRISPR/Cas9 for the treatment of haematological diseases: a journey from bacteria to the bedside.

Authors:  Olivier Humbert; Clare Samuelson; Hans-Peter Kiem
Journal:  Br J Haematol       Date:  2020-06-07       Impact factor: 6.998

6.  CRISPR/Cas9-mediated gene knockout is insensitive to target copy number but is dependent on guide RNA potency and Cas9/sgRNA threshold expression level.

Authors:  Garmen Yuen; Fehad J Khan; Shaojian Gao; Jayne M Stommel; Eric Batchelor; Xiaolin Wu; Ji Luo
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

Review 7.  Glioblastoma: new therapeutic strategies to address cellular and genomic complexity.

Authors:  Xue Cai; Michael E Sughrue
Journal:  Oncotarget       Date:  2017-12-20

Review 8.  CRISPR-Cas9: a promising genetic engineering approach in cancer research.

Authors:  Zubair Ahmed Ratan; Young-Jin Son; Mohammad Faisal Haidere; Bhuiyan Mohammad Mahtab Uddin; Md Abdullah Yusuf; Sojib Bin Zaman; Jong-Hoon Kim; Laila Anjuman Banu; Jae Youl Cho
Journal:  Ther Adv Med Oncol       Date:  2018-02-05       Impact factor: 8.168

9.  A Functionally Robust Phenotypic Screen that Identifies Drug Resistance-associated Genes Using 3D Cell Culture.

Authors:  Sun-Young Lee; Mina J Bissell
Journal:  Bio Protoc       Date:  2018-11-20

10.  In silico prediction of novel therapeutic targets using gene-disease association data.

Authors:  Enrico Ferrero; Ian Dunham; Philippe Sanseau
Journal:  J Transl Med       Date:  2017-08-29       Impact factor: 5.531

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