Literature DB >> 28603324

Adjusting background noise in cluster analyses of longitudinal data.

Shengtong Han1, Hongmei Zhang1, Wilfried Karmaus1, Graham Roberts2, Hasan Arshad3.   

Abstract

Background noise in cluster analyses can potentially mask the true underlying patterns. To tease out patterns uniquely to certain populations, a Bayesian semi-parametric clustering method is presented. It infers and adjusts background noise. The method is built upon a mixture of the Dirichlet process and a point mass function. Simulations demonstrate the effectiveness of the proposed method. The method is then applied to analyze a longitudinal data set on allergic sensitization and asthma status.

Entities:  

Keywords:  Bayesian methods; Clustering; Dirichlet process; Longitudinal data

Year:  2016        PMID: 28603324      PMCID: PMC5464744          DOI: 10.1016/j.csda.2016.11.009

Source DB:  PubMed          Journal:  Comput Stat Data Anal        ISSN: 0167-9473            Impact factor:   1.681


  6 in total

1.  The clustering of regression models method with applications in gene expression data.

Authors:  Li-Xuan Qin; Steven G Self
Journal:  Biometrics       Date:  2006-06       Impact factor: 2.571

2.  KmL: a package to cluster longitudinal data.

Authors:  Christophe Genolini; Bruno Falissard
Journal:  Comput Methods Programs Biomed       Date:  2011-06-25       Impact factor: 5.428

3.  Spiked Dirichlet Process Prior for Bayesian Multiple Hypothesis Testing in Random Effects Models.

Authors:  Sinae Kim; David B Dahl; Marina Vannucci
Journal:  Bayesian Anal       Date:  2009       Impact factor: 3.728

4.  Effect of data normalization on fuzzy clustering of DNA microarray data.

Authors:  Seo Young Kim; Jae Won Lee; Jong Sung Bae
Journal:  BMC Bioinformatics       Date:  2006-03-14       Impact factor: 3.169

5.  Effect of environmental factors on the development of allergic disorders in infancy.

Authors:  S H Arshad; D W Hide
Journal:  J Allergy Clin Immunol       Date:  1992-08       Impact factor: 10.793

6.  The interaction of genetic variants and DNA methylation of the interleukin-4 receptor gene increase the risk of asthma at age 18 years.

Authors:  Nelís Soto-Ramírez; Syed Hasan Arshad; John W Holloway; Hongmei Zhang; Eric Schauberger; Susan Ewart; Veeresh Patil; Wilfried Karmaus
Journal:  Clin Epigenetics       Date:  2013-01-03       Impact factor: 6.551

  6 in total

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