| Literature DB >> 28592722 |
Thi Lan Thanh Bien1,2,3, Ngo Vy Thao1,4, Shin-Ichi Kitamura1, Yumiko Obayashi1, Satoru Suzuki1.
Abstract
Extracellular DNA (exDNA) is released from bacterial cells through various processes. The antibiotic resistance genes (ARGs) coded on exDNA may be horizontally transferred among bacterial communities by natural transformation. We quantitated the released/leaked tetracycline resistance gene, tet(M) over time under grazing stress by ciliates and heterotrophic nanoflagellates (HNFs), and found that extracellular tet(M) (ex-tetM) increased with bacterial grazing. Separate microcosms containing tet(M)-possessing bacteria with ciliates or HNFs were prepared. The copy number of ex-tetM in seawater in the ciliate microcosm rapidly increased until 3 d after the incubation, whereas that in the HNF microcosm showed a slower increase until 20 d. The copy number of ex-tetM was stable in both cases throughout the incubation period, suggesting that extracellular ARGs are preserved in the environment, even in the presence of grazers. Additionally, ARGs in bacterial cells were constant in the presence of grazers. These results suggest that ARGs are not rapidly extinguished in a marine environment under grazing stress.Entities:
Keywords: antibiotic resistance gene; ciliate; grazing; heterotrophic nanoflagellate
Mesh:
Substances:
Year: 2017 PMID: 28592722 PMCID: PMC5478541 DOI: 10.1264/jsme2.ME17042
Source DB: PubMed Journal: Microbes Environ ISSN: 1342-6311 Impact factor: 2.912
Initial community composition in each microcosm
| Microcosm | 04Ya311 (CFU mL−1) | IOW15 (cells mL−1) | IOW23 (cells mL−1) | ||
|---|---|---|---|---|---|
| Mono-culture | |||||
| 04Ya311 alone | 6.5–9.1×107 | — | — | — | — |
| — | 2.1–4.1×103 | — | — | — | |
| — | — | 3.9–5.1×103 | — | — | |
| IOW15 alone | — | — | — | 2.3–2.7×104 | — |
| IOW23 alone | — | — | — | — | 1.4–1.6×104 |
|
| |||||
| Co-culture | |||||
| 04Ya311+ | 1.7–2.3×107 | 2.1–4.1×103 | — | — | — |
| 04Ya311+ | 6.2–8.4×107 | — | 3.9–5.1×103 | — | — |
| 04Ya311+IOW15 | 1.3–1.4×108 | — | — | 2.3–2.7×104 | — |
| 04Ya311+IOW23 | 1.3–1.4×108 | — | — | — | 1.4–1.6×104 |
| 04Ya311+ | 1.8–1.9×107 | 3.3–3.6×103 | — | 6.6–9.3×103 | — |
Fig. 1Time-course changes in bacterial densities (lines) and extracellular tet(M) copy numbers (bars) (A–C). 04Ya311 alone (A), a co-culture of 04Ya311 with ciliates (B) and with HNFs (C). The protist number in the same microcosms are shown separately in (D, E), where dotted lines indicate the protist alone in control microcosms. Cell numbers (line) are the average of two species, and data from each species are indicated with the symbol placed below the panels. The small circles in bar graphs in A–C show duplicate values of the extracellular tet(M) copy number, in which error bars represent the standard error of three measurements of each qPCR value. (*) ex-tetM copies mL−1 and bacterial CFU mL−1 show significant differences (p<0.05) between pairs of time points.
Fig. 2Cell number in a co-culture of three microbes. A bacterium (Ya), ciliate (P. marina), and HNF (IOW15) are employed. A mixture of the three species (A), and a mixture of P. marina and IOW15 without 04Ya311 (B). Each value is the average of two independent experiments.
Fig. 3Intracellular tet(M) copy number in a population of 04Ya311 alone (A), 04Ya311 with a ciliate (B), and 04Ya311 with a HNF (C). Each bar shows the average of two independent experiments, and the small circles are duplicate values. Error bars represent a standard error of three measurements of each qPCR value.