Literature DB >> 28590496

Artefact suppression in 5-pulse double electron electron resonance for distance distribution measurements.

Frauke D Breitgoff1, Janne Soetbeer, Andrin Doll, Gunnar Jeschke, Yevhen O Polyhach.   

Abstract

A 5-pulse version of the Double Electron Electron Resonance (DEER) experiment with Carr-Purcell delays and an additional pump pulse has been shown to significantly extend the experimentally accessible distance range in cases where nuclear spin diffusion dominates electron spin phase memory loss [Borbat et al., J. Phys. Chem. Lett., 2013, 4, 170]. We show that the sequence also prolongs coherence decay for spin labels in or near lipid bilayers, where this decay is mono-exponential. Compared to 4-pulse DEER, 5-pulse DEER suffers from additional artefacts that stem from pulse imperfection and excitation band overlap. Only some of these artefacts can be suppressed by phase cycling and the remaining ones have hindered widespread utilization of the method. Here, we report previously unknown additional artefact contributions stemming from overlap between the excitation bands of the microwave pulses that introduce additional dipolar evolution pathways. Experimental conditions are analyzed in detail that suppress these as well as the already known artefacts. Such suppression results in data that contain at most the partial excitation artefact, which can be deliberately shifted in time by a change in pulse timing without affecting the wanted contribution.

Entities:  

Year:  2017        PMID: 28590496     DOI: 10.1039/c7cp01488k

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  5 in total

1.  Dipolar pathways in dipolar EPR spectroscopy.

Authors:  Luis Fábregas-Ibáñez; Maxx H Tessmer; Gunnar Jeschke; Stefan Stoll
Journal:  Phys Chem Chem Phys       Date:  2022-01-26       Impact factor: 3.676

2.  NMR and EPR reveal a compaction of the RNA-binding protein FUS upon droplet formation.

Authors:  Leonidas Emmanouilidis; Laura Esteban-Hofer; Fred F Damberger; Tebbe de Vries; Cristina K X Nguyen; Luis Fábregas Ibáñez; Simon Mergenthal; Enrico Klotzsch; Maxim Yulikov; Gunnar Jeschke; Frédéric H-T Allain
Journal:  Nat Chem Biol       Date:  2021-03-08       Impact factor: 15.040

3.  Reconstruction of Coupled Intra- and Interdomain Protein Motion from Nuclear and Electron Magnetic Resonance.

Authors:  Alexandra Born; Janne Soetbeer; Frauke Breitgoff; Morkos A Henen; Nikolaos Sgourakis; Yevhen Polyhach; Parker J Nichols; Dean Strotz; Gunnar Jeschke; Beat Vögeli
Journal:  J Am Chem Soc       Date:  2021-09-27       Impact factor: 16.383

4.  DEER and RIDME Measurements of the Nitroxide-Spin Labelled Copper-Bound Amine Oxidase Homodimer from Arthrobacter Globiformis.

Authors:  Hannah Russell; Rachel Stewart; Christopher Prior; Vasily S Oganesyan; Thembaninkosi G Gaule; Janet E Lovett
Journal:  Appl Magn Reson       Date:  2021-03-29       Impact factor: 0.831

5.  Ligand-specific conformational change drives interdomain allostery in Pin1.

Authors:  Alexandra Born; Janne Soetbeer; Morkos A Henen; Frauke Breitgoff; Yevhen Polyhach; Gunnar Jeschke; Beat Vögeli
Journal:  Nat Commun       Date:  2022-08-04       Impact factor: 17.694

  5 in total

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