Literature DB >> 28585805

Ligand-Specific Restriction of Extracellular Conformational Dynamics Constrains Signaling of the M2 Muscarinic Receptor.

Marcel Bermudez1, Andreas Bock2,3, Fabian Krebs4, Ulrike Holzgrabe5, Klaus Mohr4, Martin J Lohse2,3, Gerhard Wolber1.   

Abstract

G protein-coupled receptors transmit extracellular signals across cell membranes via different G protein classes and β-arrestins. Some pathways may be therapeutically beneficial, whereas others may be detrimental under certain pathophysiological conditions. For many GPCRs, biased agonists are available, which preferentially signal through one pathway or a subset of pathways, and harnessing biased agonism could be a potential novel therapeutic strategy. However, the incomplete mechanistic understanding of biased agonism hampers rational design of biased ligands. Using the muscarinic M2 receptor as a model system, we have analyzed the relationship between ligand-dependent conformational changes as revealed in all-atom MD simulations and the activation of specific G proteins. We find that the extent of closure of the extracellular, allosteric binding site interferes with the activation of certain G proteins. Our data allow the rational design of Gi-biased agonists at the M2 receptor and delineate a simple principle which may be translated to other GPRCs.

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Year:  2017        PMID: 28585805     DOI: 10.1021/acschembio.7b00275

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  4 in total

1.  Encoding mu-opioid receptor biased agonism with interaction fingerprints.

Authors:  R Bruno Hernández-Alvarado; Abraham Madariaga-Mazón; Fernando Cosme-Vela; Andrés F Marmolejo-Valencia; Adel Nefzi; Karina Martinez-Mayorga
Journal:  J Comput Aided Mol Des       Date:  2021-10-29       Impact factor: 3.686

Review 2.  How Do Molecular Dynamics Data Complement Static Structural Data of GPCRs.

Authors:  Mariona Torrens-Fontanals; Tomasz Maciej Stepniewski; David Aranda-García; Adrián Morales-Pastor; Brian Medel-Lacruz; Jana Selent
Journal:  Int J Mol Sci       Date:  2020-08-18       Impact factor: 5.923

3.  The Role of Orthosteric Building Blocks of Bitopic Ligands for Muscarinic M1 Receptors.

Authors:  Daniela Volpato; Michael Kauk; Regina Messerer; Marcel Bermudez; Gerhard Wolber; Andreas Bock; Carsten Hoffmann; Ulrike Holzgrabe
Journal:  ACS Omega       Date:  2020-12-01

4.  Biased Ligands Differentially Shape the Conformation of the Extracellular Loop Region in 5-HT2B Receptors.

Authors:  Katrin Denzinger; Trung Ngoc Nguyen; Theresa Noonan; Gerhard Wolber; Marcel Bermudez
Journal:  Int J Mol Sci       Date:  2020-12-20       Impact factor: 5.923

  4 in total

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