Literature DB >> 28585047

Aquichromatium aeriopus gen. nov., sp. nov., A Non-phototrophic Aerobic Chemoheterotrophic Bacterium, and Proposal of Aquichromatiaceae fam. nov. in the Order Chromatiales.

Liqiang Yang1, Lili Tang1,2, Lan Liu3, Nimaichand Salam3, Wen-Jun Li4, Yongyu Zhang5.   

Abstract

A gram-staining negative, non-motile, aerobic chemoheterotrophic, ovoid or short rod-shaped bacterium, designated as J89T, was isolated from a seawater sample collected from the coast of Yellow Sea in Qingdao, China. The strain grew at salinities of 1.0-6.0% (w/v) NaCl (optimum, 3.0%). Growth occurred at pH 6.0-9.0 (optimum, pH 7.0) and at 10-35 °C (optimum, 25-30 °C). The genomic DNA G+C content was determined to be 59.3 mol%. Q-8 was detected as the respiratory quinone. The major fatty acids (>10%) were summed feature 3 (C16:1 ω7c and/or C16:1 ω6c), summed feature 8 (C18:1 ω7c and/or C18:1 ω6c), and C16:0. The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, two unidentified phospholipids, and an unidentified polar lipid. Comparison of the 16S rRNA gene sequence indicated that the strain was most closely related (<91%) to members of the order Chromatiales in the class Gammaproteobacteria. Phylogenetic analyses showed that this strain represented a distinct phylogenetic lineage in the order Chromatiales and could not be assigned to any of the defined families in the order. On the basis of low sequence similarities and differential characteristics of strain J89T from the genera of neighboring families, the strain is proposed to be a representative of a novel genus Aquichromatium gen. nov. A new family Aquichromatiaceae with the type genus Aquichromatium is proposed. Strain J89T (=MCCC 1K03281T=CMRC C2017206T) is the type strain of the type species Aquichromatium aeriopus sp. nov.

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Year:  2017        PMID: 28585047     DOI: 10.1007/s00284-017-1275-1

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  31 in total

1.  Thioprofundum hispidum sp. nov., an obligately chemolithoautotrophic sulfur-oxidizing gammaproteobacterium isolated from the hydrothermal field on Suiyo Seamount, and proposal of Thioalkalispiraceae fam. nov. in the order Chromatiales.

Authors:  Koji Mori; Ken-Ichiro Suzuki; Tetsuro Urabe; Maki Sugihara; Kenji Tanaka; Moriyuki Hamada; Satoshi Hanada
Journal:  Int J Syst Evol Microbiol       Date:  2010-11-12       Impact factor: 2.747

2.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

3.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  [The in vivo spectrum as taxonomic characteristic in distribution studies of Athiorhodaceae].

Authors:  H Biebl; G Drews
Journal:  Zentralbl Bakteriol Parasitenkd Infektionskr Hyg       Date:  1969

6.  Granulosicoccus undariae sp. nov., a member of the family Granulosicoccaceae isolated from a brown algae reservoir and emended description of the genus Granulosicoccus.

Authors:  Sooyeon Park; Yong-Taek Jung; Sung-Min Won; Ja-Min Park; Jung-Hoon Yoon
Journal:  Antonie Van Leeuwenhoek       Date:  2014-08-12       Impact factor: 2.271

7.  Naxibacter alkalitolerans gen. nov., sp. nov., a novel member of the family 'Oxalobacteraceae' isolated from China.

Authors:  Ping Xu; Wen-Jun Li; Shu-Kun Tang; Yu-Qin Zhang; Guo-Zhong Chen; Hua-Hong Chen; Li-Hua Xu; Cheng-Lin Jiang
Journal:  Int J Syst Evol Microbiol       Date:  2005-05       Impact factor: 2.747

8.  Thiorhodospira sibirica gen. nov., sp. nov., a new alkaliphilic purple sulfur bacterium from a Siberian soda lake.

Authors:  I Bryantseva; V M Gorlenko; E I Kompantseva; J F Imhoff; J Süling; L Mityushina
Journal:  Int J Syst Bacteriol       Date:  1999-04

9.  Thioalkalimicrobium cyclicum sp. nov. and Thioalkalivibrio jannaschii sp. nov., novel species of haloalkaliphilic, obligately chemolithoautotrophic sulfur-oxidizing bacteria from hypersaline alkaline Mono Lake (California).

Authors:  Dimitry Yu Sorokin; Vladimir M Gorlenko; Tat'yana P Tourova; Alexandre I Tsapin; Kenneth H Nealson; Gijs J Kuenen
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

10.  Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China), and emended description of the genus Georgenia.

Authors:  Wen-Jun Li; Ping Xu; Peter Schumann; Yu-Qin Zhang; Rüdiger Pukall; Li-Hua Xu; Erko Stackebrandt; Cheng-Lin Jiang
Journal:  Int J Syst Evol Microbiol       Date:  2007-07       Impact factor: 2.747

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