Literature DB >> 28584108

Gene regulation during Drosophila eggshell patterning.

George Pyrowolakis1, Ville Veikkolainen1, Nir Yakoby2, Stanislav Y Shvartsman3.   

Abstract

A common path to the formation of complex 3D structures starts with an epithelial sheet that is patterned by inductive cues that control the spatiotemporal activities of transcription factors. These activities are then interpreted by the cis-regulatory regions of the genes involved in cell differentiation and tissue morphogenesis. Although this general strategy has been documented in multiple developmental contexts, the range of experimental models in which each of the steps can be examined in detail and evaluated in its effect on the final structure remains very limited. Studies of the Drosophila eggshell patterning provide unique insights into the multiscale mechanisms that connect gene regulation and 3D epithelial morphogenesis. Here we review the current understanding of this system, emphasizing how the recent identification of cis-regulatory regions of genes within the eggshell patterning network enables mechanistic analysis of its spatiotemporal dynamics and evolutionary diversification. It appears that cis-regulatory changes can account for only some aspects of the morphological diversity of Drosophila eggshells, such as the prominent differences in the number of the respiratory dorsal appendages. Other changes, such as the appearance of the respiratory eggshell ridges, are caused by changes in the spatial distribution of inductive signals. Both types of mechanisms are at play in this rapidly evolving system, which provides an excellent model of developmental patterning and morphogenesis.

Entities:  

Keywords:  dynamics; enhancer; evolution; network; signal

Mesh:

Year:  2017        PMID: 28584108      PMCID: PMC5468638          DOI: 10.1073/pnas.1610619114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  52 in total

1.  Evaluating thermodynamic models of enhancer activity on cellular resolution gene expression data.

Authors:  Abul Hassan Samee; Saurabh Sinha
Journal:  Methods       Date:  2013-04-26       Impact factor: 3.608

2.  The role of brinker in eggshell patterning.

Authors:  Yu Chen; Trudi Schüpbach
Journal:  Mech Dev       Date:  2006-05-16       Impact factor: 1.882

3.  Evolutionary changes in TGFα distribution underlie morphological diversity in eggshells from Drosophila species.

Authors:  Matthew G Niepielko; Nir Yakoby
Journal:  Development       Date:  2014-12       Impact factor: 6.868

4.  Spatial regulation of BMP signaling by patterned receptor expression.

Authors:  Jessica Lembong; Nir Yakoby; Stanislav Y Shvartsman
Journal:  Tissue Eng Part A       Date:  2008-09       Impact factor: 3.845

5.  Graded Egfr activity patterns the Drosophila eggshell independently of autocrine feedback.

Authors:  Jean-François Boisclair Lachance; Mariana Fregoso Lomas; Aliaa Eleiche; Phoenix Bouchard Kerr; Laura A Nilson
Journal:  Development       Date:  2009-07-29       Impact factor: 6.868

6.  The role of Dpp and its inhibitors during eggshell patterning in Drosophila.

Authors:  Bhupendra V Shravage; Gabriela Altmann; Martin Technau; Siegfried Roth
Journal:  Development       Date:  2007-05-16       Impact factor: 6.868

7.  Sprouty is a general inhibitor of receptor tyrosine kinase signaling.

Authors:  A Reich; A Sapir; B Shilo
Journal:  Development       Date:  1999-09       Impact factor: 6.868

8.  Combined activities of Gurken and decapentaplegic specify dorsal chorion structures of the Drosophila egg.

Authors:  F Peri; S Roth
Journal:  Development       Date:  2000-02       Impact factor: 6.868

9.  Co-option of a coordinate system defined by the EGFr and Dpp pathways in the evolution of a morphological novelty.

Authors:  Barbara Mi Vreede; Jeremy A Lynch; Siegfried Roth; Elio Sucena
Journal:  Evodevo       Date:  2013-03-01       Impact factor: 2.250

10.  The TGF-beta signaling pathway is essential for Drosophila oogenesis.

Authors:  V Twombly; R K Blackman; H Jin; J M Graff; R W Padgett; W M Gelbart
Journal:  Development       Date:  1996-05       Impact factor: 6.868

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  7 in total

1.  Gene regulatory networks and network models in development and evolution.

Authors:  Neil Shubin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-06       Impact factor: 11.205

2.  Downregulation of homeodomain protein Cut is essential for Drosophila follicle maturation and ovulation.

Authors:  Elizabeth M Knapp; Wei Li; Jianjun Sun
Journal:  Development       Date:  2019-09-19       Impact factor: 6.868

3.  Two Drosophilids exhibit distinct EGF pathway patterns in oogenesis.

Authors:  Kenley N O'Hanlon; Rachel A Dam; Sophie L Archambeault; Celeste A Berg
Journal:  Dev Genes Evol       Date:  2017-12-20       Impact factor: 0.900

4.  A Unifying Framework for Understanding Biological Structures and Functions Across Levels of Biological Organization.

Authors:  M A Herman; B R Aiello; J D DeLong; H Garcia-Ruiz; A L González; W Hwang; C McBeth; E A Stojković; M A Trakselis; N Yakoby
Journal:  Integr Comp Biol       Date:  2022-02-05       Impact factor: 3.326

5.  Simple Expression Domains Are Regulated by Discrete CRMs During Drosophila Oogenesis.

Authors:  Nicole T Revaitis; Robert A Marmion; Maira Farhat; Vesile Ekiz; Wei Wang; Nir Yakoby
Journal:  G3 (Bethesda)       Date:  2017-08-07       Impact factor: 3.154

6.  The ETS-transcription factor Pointed is sufficient to regulate the posterior fate of the follicular epithelium.

Authors:  Cody A Stevens; Nicole T Revaitis; Rumkan Caur; Nir Yakoby
Journal:  Development       Date:  2020-11-15       Impact factor: 6.862

7.  EpiLog: A software for the logical modelling of epithelial dynamics.

Authors:  Pedro L Varela; Camila V Ramos; Pedro T Monteiro; Claudine Chaouiya
Journal:  F1000Res       Date:  2018-07-27
  7 in total

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