Literature DB >> 28581740

Conformational Selection as the Mechanism of Guest Binding in a Flexible Supramolecular Host.

Cynthia M Hong1, David M Kaphan1, Robert G Bergman1, Kenneth N Raymond1, F Dean Toste1.   

Abstract

This study offers a detailed mechanistic investigation of host-guest encapsulation behavior in a new enzyme-mimetic metal-ligand host and provides the first observation of a conformational selection mechanism (as opposed to induced fit) in a supramolecular system. The Ga4L4 host described features a C3-symmetric ligand motif with meta-substituted phenyl spacers, which enables the host to initially self-assemble into an S4-symmetric structure and then subsequently isomerize to a T-symmetric tetrahedron for better accommodation of a sufficiently large guest. Selective inversion recovery 1H NMR studies provide structural insights into the self-exchange behaviors of the host and the guest individually in this dynamic system. Kinetic analysis of the encapsulation-isomerization event revealed that increasing the concentration of guest inhibits the rate of host-guest relaxation, a key distinguishing feature of conformational selection. A comprehensive study of this simple enzyme mimic provides insight into analogous behavior in biophysics and enzymology and aims to inform the design of efficient self-assembled microenvironment catalysts.

Entities:  

Year:  2017        PMID: 28581740     DOI: 10.1021/jacs.7b03812

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

Review 1.  Biomedically Relevant Self-Assembled Metallacycles and Metallacages.

Authors:  Hajar Sepehrpour; Wenxin Fu; Yan Sun; Peter J Stang
Journal:  J Am Chem Soc       Date:  2019-08-29       Impact factor: 15.419

2.  Phenylthiol-BODIPY-based supramolecular metallacycles for synergistic tumor chemo-photodynamic therapy.

Authors:  Xiongjie Lin; Feng Chen; Xiujun Yu; Heng Wang; Huayu Qiu; Yang Li; Shouchun Yin; Peter J Stang
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-11       Impact factor: 12.779

3.  Multiple Stimuli-Responsive Conformational Exchanges of Biphen[3]arene Macrocycle.

Authors:  Yiliang Wang; Liu-Pan Yang; Xiang Zhao; Lei Cui; Jian Li; Xueshun Jia; Jianhui Fang; Chunju Li
Journal:  Molecules       Date:  2020-12-08       Impact factor: 4.411

Review 4.  Mechanisms of ligand binding.

Authors:  Enrico Di Cera
Journal:  Biophys Rev       Date:  2020-12

5.  Quantified structural speciation in self-sorted CoII6L4 cage systems.

Authors:  Felix J Rizzuto; Marion Kieffer; Jonathan R Nitschke
Journal:  Chem Sci       Date:  2018-01-10       Impact factor: 9.825

6.  Probing the Dynamics of the Imine-Based Pentafoil Knot and Pentameric Circular Helicate Assembly.

Authors:  Jean-François Ayme; Jonathon E Beves; Christopher J Campbell; David A Leigh
Journal:  J Am Chem Soc       Date:  2019-02-14       Impact factor: 15.419

7.  Induced-fit expansion and contraction of a self-assembled nanocube finely responding to neutral and anionic guests.

Authors:  Yi-Yang Zhan; Tatsuo Kojima; Takashi Nakamura; Toshihiro Takahashi; Satoshi Takahashi; Yohei Haketa; Yoshiaki Shoji; Hiromitsu Maeda; Takanori Fukushima; Shuichi Hiraoka
Journal:  Nat Commun       Date:  2018-10-31       Impact factor: 14.919

8.  Interplay of water and a supramolecular capsule for catalysis of reductive elimination reaction from gold.

Authors:  Valerie Vaissier Welborn; Wan-Lu Li; Teresa Head-Gordon
Journal:  Nat Commun       Date:  2020-01-21       Impact factor: 14.919

9.  Coordination Cages Selectively Transport Molecular Cargoes Across Liquid Membranes.

Authors:  Bao-Nguyen T Nguyen; John D Thoburn; Angela B Grommet; Duncan J Howe; Tanya K Ronson; Hugh P Ryan; Jeanne L Bolliger; Jonathan R Nitschke
Journal:  J Am Chem Soc       Date:  2021-08-02       Impact factor: 15.419

  9 in total

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