Literature DB >> 28580796

Artificial cell mimics as simplified models for the study of cell biology.

Ali Salehi-Reyhani1, Oscar Ces1, Yuval Elani1.   

Abstract

Living cells are hugely complex chemical systems composed of a milieu of distinct chemical species (including DNA, proteins, lipids, and metabolites) interconnected with one another through a vast web of interactions: this complexity renders the study of cell biology in a quantitative and systematic manner a difficult task. There has been an increasing drive towards the utilization of artificial cells as cell mimics to alleviate this, a development that has been aided by recent advances in artificial cell construction. Cell mimics are simplified cell-like structures, composed from the bottom-up with precisely defined and tunable compositions. They allow specific facets of cell biology to be studied in isolation, in a simplified environment where control of variables can be achieved without interference from a living and responsive cell. This mini-review outlines the core principles of this approach and surveys recent key investigations that use cell mimics to address a wide range of biological questions. It will also place the field in the context of emerging trends, discuss the associated limitations, and outline future directions of the field. Impact statement Recent years have seen an increasing drive to construct cell mimics and use them as simplified experimental models to replicate and understand biological phenomena in a well-defined and controlled system. By summarizing the advances in this burgeoning field, and using case studies as a basis for discussion on the limitations and future directions of this approach, it is hoped that this minireview will spur others in the experimental biology community to use artificial cells as simplified models with which to probe biological systems.

Entities:  

Keywords:  Artificial cells; biomimetics; biophysics; synthetic biology

Mesh:

Year:  2017        PMID: 28580796      PMCID: PMC5528198          DOI: 10.1177/1535370217711441

Source DB:  PubMed          Journal:  Exp Biol Med (Maywood)        ISSN: 1535-3699


  106 in total

1.  Shiga toxin induces tubular membrane invaginations for its uptake into cells.

Authors:  Winfried Römer; Ludwig Berland; Valérie Chambon; Katharina Gaus; Barbara Windschiegl; Danièle Tenza; Mohamed R E Aly; Vincent Fraisier; Jean-Claude Florent; David Perrais; Christophe Lamaze; Graça Raposo; Claudia Steinem; Pierre Sens; Patricia Bassereau; Ludger Johannes
Journal:  Nature       Date:  2007-11-29       Impact factor: 49.962

2.  COPI coat assembly occurs on liquid-disordered domains and the associated membrane deformations are limited by membrane tension.

Authors:  Jean-Baptiste Manneville; Jean-François Casella; Ernesto Ambroggio; Pierre Gounon; Julien Bertherat; Patricia Bassereau; Jean Cartaud; Bruno Antonny; Bruno Goud
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-30       Impact factor: 11.205

3.  Genome replication, synthesis, and assembly of the bacteriophage T7 in a single cell-free reaction.

Authors:  Jonghyeon Shin; Paul Jardine; Vincent Noireaux
Journal:  ACS Synth Biol       Date:  2012-07-10       Impact factor: 5.110

4.  Physical principles underlying the transduction of bilayer deformation forces during mechanosensitive channel gating.

Authors:  Eduardo Perozo; Anna Kloda; D Marien Cortes; Boris Martinac
Journal:  Nat Struct Biol       Date:  2002-09

Review 5.  Multiscale computational models of complex biological systems.

Authors:  Joseph Walpole; Jason A Papin; Shayn M Peirce
Journal:  Annu Rev Biomed Eng       Date:  2013-04-29       Impact factor: 9.590

6.  Separation of liquid phases in giant vesicles of ternary mixtures of phospholipids and cholesterol.

Authors:  Sarah L Veatch; Sarah L Keller
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

7.  Programming an in vitro DNA oscillator using a molecular networking strategy.

Authors:  Kevin Montagne; Raphael Plasson; Yasuyuki Sakai; Teruo Fujii; Yannick Rondelez
Journal:  Mol Syst Biol       Date:  2011-02-01       Impact factor: 11.429

8.  Synthetic in vitro transcriptional oscillators.

Authors:  Jongmin Kim; Erik Winfree
Journal:  Mol Syst Biol       Date:  2011-02-01       Impact factor: 11.429

9.  The Differential Response of Proteins to Macromolecular Crowding.

Authors:  Michela Candotti; Modesto Orozco
Journal:  PLoS Comput Biol       Date:  2016-07-29       Impact factor: 4.475

10.  Myosin motors fragment and compact membrane-bound actin filaments.

Authors:  Sven K Vogel; Zdenek Petrasek; Fabian Heinemann; Petra Schwille
Journal:  Elife       Date:  2013-01-08       Impact factor: 8.140

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  23 in total

1.  Community building in synthetic biology.

Authors:  Oscar Ces; Yuval Elani
Journal:  Exp Biol Med (Maywood)       Date:  2019-03

2.  Liquid-liquid phase separation in artificial cells.

Authors:  Charles D Crowe; Christine D Keating
Journal:  Interface Focus       Date:  2018-08-17       Impact factor: 3.906

3.  Membrane remodelling by a lipidated endosomal sorting complex required for transport-III chimera, in vitro.

Authors:  C J Marklew; A Booth; P A Beales; B Ciani
Journal:  Interface Focus       Date:  2018-08-17       Impact factor: 3.906

4.  Inkjet-printed micro-calibration standards for ultraquantitative Raman spectral cytometry.

Authors:  Vernon LaLone; Maria V Fawaz; Jomar Morales-Mercado; Márcio A Mourão; Catherine S Snyder; Sang Yeop Kim; Andrew P Lieberman; Anish Tuteja; Geeta Mehta; Theodore J Standiford; Krishnan Raghavendran; Kerby Shedden; Anna Schwendeman; Kathleen A Stringer; Gus R Rosania
Journal:  Analyst       Date:  2019-05-22       Impact factor: 4.616

Review 5.  Engineering the Surface of Therapeutic "Living" Cells.

Authors:  Jooyeon Park; Brenda Andrade; Yongbeom Seo; Myung-Joo Kim; Steven C Zimmerman; Hyunjoon Kong
Journal:  Chem Rev       Date:  2018-01-16       Impact factor: 60.622

6.  Stimuli-responsive vesicles as distributed artificial organelles for bacterial activation.

Authors:  Ignacio Gispert; James W Hindley; Colin P Pilkington; Hansa Shree; Laura M C Barter; Oscar Ces; Yuval Elani
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-12       Impact factor: 12.779

7.  Dynamic Reconfiguration of Subcompartment Architectures in Artificial Cells.

Authors:  Greta Zubaite; James W Hindley; Oscar Ces; Yuval Elani
Journal:  ACS Nano       Date:  2022-06-13       Impact factor: 18.027

8.  Chemical Neural Networks Inside Synthetic Cells? A Proposal for Their Realization and Modeling.

Authors:  Pier Luigi Gentili; Pasquale Stano
Journal:  Front Bioeng Biotechnol       Date:  2022-06-06

9.  Clusters of Nanoscale Liposomes Modulate the Release of Encapsulated Species and Mimic the Compartmentalization Intrinsic in Cell Structures.

Authors:  Igor Kevin Mkam Tsengam; Marzhana Omarova; Lauren Shepherd; Nicholas Sandoval; Jibao He; Elizabeth Kelley; Vijay John
Journal:  ACS Appl Nano Mater       Date:  2019

10.  Constructing vesicle-based artificial cells with embedded living cells as organelle-like modules.

Authors:  Yuval Elani; Tatiana Trantidou; Douglas Wylie; Linda Dekker; Karen Polizzi; Robert V Law; Oscar Ces
Journal:  Sci Rep       Date:  2018-03-14       Impact factor: 4.379

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