Literature DB >> 28575802

Themes and variations in gene regulation by extracytoplasmic function (ECF) sigma factors.

Elena Sineva1, Maria Savkina1, Sarah E Ades2.   

Abstract

The ECF sigma family was identified 23 years ago as a distinct group of σ70-like factors. ECF sigma factors have since emerged as a major form of bacterial signal transduction that can be grouped into over 50 phylogenetically distinct subfamilies. Advances in our understanding of these sigma factors and the signaling pathways governing their activity have elucidated conserved features as well as aspects that have evolved over time. All ECF sigma factors are predicted to share a common streamlined domain structure and mode of promoter interaction. The activity of most ECF sigma factors is controlled by an anti-sigma factor. The nature of the anti-sigma factor and the activating signaling pathways appear to be conserved within ECF families, while considerable diversity exists between different families.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28575802      PMCID: PMC5534382          DOI: 10.1016/j.mib.2017.05.004

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  71 in total

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Authors:  Hee-Jeon Hong; Mark S B Paget; Mark J Buttner
Journal:  Mol Microbiol       Date:  2002-06       Impact factor: 3.501

2.  A transcriptional response to singlet oxygen, a toxic byproduct of photosynthesis.

Authors:  Jennifer R Anthony; Kristin L Warczak; Timothy J Donohue
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-26       Impact factor: 11.205

3.  Two proteolytic modules are involved in regulated intramembrane proteolysis of Bacillus subtilis RsiW.

Authors:  Janine Heinrich; Kerstin Hein; Thomas Wiegert
Journal:  Mol Microbiol       Date:  2009-11-02       Impact factor: 3.501

4.  The activity of σV, an extracytoplasmic function σ factor of Bacillus subtilis, is controlled by regulated proteolysis of the anti-σ factor RsiV.

Authors:  Jessica L Hastie; Kyle B Williams; Craig D Ellermeier
Journal:  J Bacteriol       Date:  2013-05-17       Impact factor: 3.490

5.  Characterization of the inducible nickel and cobalt resistance determinant cnr from pMOL28 of Alcaligenes eutrophus CH34.

Authors:  H Liesegang; K Lemke; R A Siddiqui; H G Schlegel
Journal:  J Bacteriol       Date:  1993-02       Impact factor: 3.490

6.  Structural basis for the redox sensitivity of the Mycobacterium tuberculosis SigK-RskA σ-anti-σ complex.

Authors:  Jinal Shukla; Radhika Gupta; Krishan Gopal Thakur; Rajesh Gokhale; B Gopal
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-03-19

7.  Conserved and variable functions of the sigmaE stress response in related genomes.

Authors:  Virgil A Rhodius; Won Chul Suh; Gen Nonaka; Joyce West; Carol A Gross
Journal:  PLoS Biol       Date:  2006-01       Impact factor: 8.029

8.  Extracytoplasmic function σ factors of the widely distributed group ECF41 contain a fused regulatory domain.

Authors:  Tina Wecke; Petra Halang; Anna Staroń; Yann S Dufour; Timothy J Donohue; Thorsten Mascher
Journal:  Microbiologyopen       Date:  2012-06       Impact factor: 3.139

9.  Design of orthogonal genetic switches based on a crosstalk map of σs, anti-σs, and promoters.

Authors:  Virgil A Rhodius; Thomas H Segall-Shapiro; Brian D Sharon; Amar Ghodasara; Ekaterina Orlova; Hannah Tabakh; David H Burkhardt; Kevin Clancy; Todd C Peterson; Carol A Gross; Christopher A Voigt
Journal:  Mol Syst Biol       Date:  2013-10-29       Impact factor: 11.429

10.  The anti-sigma factor RsrA responds to oxidative stress by reburying its hydrophobic core.

Authors:  Karthik V Rajasekar; Konrad Zdanowski; Jun Yan; Jonathan T S Hopper; Marie-Louise R Francis; Colin Seepersad; Connor Sharp; Ludovic Pecqueur; Jörn M Werner; Carol V Robinson; Shabaz Mohammed; Jennifer R Potts; Colin Kleanthous
Journal:  Nat Commun       Date:  2016-07-19       Impact factor: 14.919

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  41 in total

1.  Evolutionary couplings of amino acid residues reveal structure and function of bacterial signaling proteins.

Authors:  Hendrik Szurmant
Journal:  Mol Microbiol       Date:  2019-07-03       Impact factor: 3.501

2.  Deciphering the essentiality and function of the anti-σM factors in Bacillus subtilis.

Authors:  Heng Zhao; Daniel M Roistacher; John D Helmann
Journal:  Mol Microbiol       Date:  2019-03-13       Impact factor: 3.501

3.  Signal Peptidase Is Necessary and Sufficient for Site 1 Cleavage of RsiV in Bacillus subtilis in Response to Lysozyme.

Authors:  Ana N Castro; Lincoln T Lewerke; Jessica L Hastie; Craig D Ellermeier
Journal:  J Bacteriol       Date:  2018-05-09       Impact factor: 3.490

4.  Interactions between DksA and Stress-Responsive Alternative Sigma Factors Control Inorganic Polyphosphate Accumulation in Escherichia coli.

Authors:  Michael J Gray
Journal:  J Bacteriol       Date:  2020-06-25       Impact factor: 3.490

5.  RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.

Authors:  Lingting Li; Vadim Molodtsov; Wei Lin; Richard H Ebright; Yu Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-03       Impact factor: 11.205

6.  Sigma factor RpoN employs a dual transcriptional regulation for controlling twitching motility and biofilm formation in Lysobacter enzymogenes OH11.

Authors:  Sen Han; Danyu Shen; Yun Zhao; Dan Xu; Jing Liu; Shan-Ho Chou; Fengquan Liu; Guoliang Qian
Journal:  Curr Genet       Date:  2017-10-24       Impact factor: 3.886

7.  OxyR-Dependent Transcription Response of Sinorhizobium meliloti to Oxidative Stress.

Authors:  Alisa P Lehman; Sharon R Long
Journal:  J Bacteriol       Date:  2018-03-12       Impact factor: 3.490

8.  Alternative Sigma Factor RpoX Is a Part of the RpoE Regulon and Plays Distinct Roles in Stress Responses, Motility, Biofilm Formation, and Hemolytic Activities in the Marine Pathogen Vibrio alginolyticus.

Authors:  Dan Gu; Jun Zhang; Yuan Hao; Rongjing Xu; Yuanxing Zhang; Yue Ma; Qiyao Wang
Journal:  Appl Environ Microbiol       Date:  2019-07-01       Impact factor: 4.792

Review 9.  Diverse and unified mechanisms of transcription initiation in bacteria.

Authors:  James Chen; Hande Boyaci; Elizabeth A Campbell
Journal:  Nat Rev Microbiol       Date:  2020-10-29       Impact factor: 60.633

Review 10.  What bacteria want.

Authors:  Michael Y Galperin
Journal:  Environ Microbiol       Date:  2018-10-25       Impact factor: 5.491

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