Literature DB >> 28573577

Time-Resolved Macromolecular Crystallography at Modern X-Ray Sources.

Marius Schmidt1.   

Abstract

Time-resolved macromolecular crystallography unifies protein structure determination with chemical kinetics. With the advent of fourth generation X-ray sources the time-resolution can be on the order of 10-40 fs, which opens the ultrafast time scale to structure determination. Fundamental motions and transitions associated with chemical reactions in proteins can now be observed. Moreover, new experimental approaches at synchrotrons allow for the straightforward investigation of all kind of reactions in biological macromolecules. Here, recent developments in the field are reviewed.

Keywords:  Chemical kinetics; Structure based enzymology; Time-resolved macromolecular crystallography; Time-resolved serial femtosecond crystallography

Mesh:

Substances:

Year:  2017        PMID: 28573577     DOI: 10.1007/978-1-4939-7000-1_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  7 in total

1.  X-rays in the Cryo-Electron Microscopy Era: Structural Biology's Dynamic Future.

Authors:  Susannah C Shoemaker; Nozomi Ando
Journal:  Biochemistry       Date:  2018-01-11       Impact factor: 3.162

2.  Making sense of SFX data: standards for data and structure validation for a non-standard experiment that has come of age.

Authors:  Clyde A Smith
Journal:  IUCrJ       Date:  2021-06-30       Impact factor: 4.769

3.  Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography.

Authors:  Jose L Olmos; Suraj Pandey; Jose M Martin-Garcia; George Calvey; Andrea Katz; Juraj Knoska; Christopher Kupitz; Mark S Hunter; Mengning Liang; Dominik Oberthuer; Oleksandr Yefanov; Max Wiedorn; Michael Heyman; Mark Holl; Kanupriya Pande; Anton Barty; Mitchell D Miller; Stephan Stern; Shatabdi Roy-Chowdhury; Jesse Coe; Nirupa Nagaratnam; James Zook; Jacob Verburgt; Tyler Norwood; Ishwor Poudyal; David Xu; Jason Koglin; Matthew H Seaberg; Yun Zhao; Saša Bajt; Thomas Grant; Valerio Mariani; Garrett Nelson; Ganesh Subramanian; Euiyoung Bae; Raimund Fromme; Russell Fung; Peter Schwander; Matthias Frank; Thomas A White; Uwe Weierstall; Nadia Zatsepin; John Spence; Petra Fromme; Henry N Chapman; Lois Pollack; Lee Tremblay; Abbas Ourmazd; George N Phillips; Marius Schmidt
Journal:  BMC Biol       Date:  2018-05-31       Impact factor: 7.431

Review 4.  Protein ensembles link genotype to phenotype.

Authors:  Ruth Nussinov; Chung-Jung Tsai; Hyunbum Jang
Journal:  PLoS Comput Biol       Date:  2019-06-20       Impact factor: 4.475

5.  Time-resolved serial femtosecond crystallography at the European XFEL.

Authors:  Suraj Pandey; Richard Bean; Tokushi Sato; Ishwor Poudyal; Johan Bielecki; Jorvani Cruz Villarreal; Oleksandr Yefanov; Valerio Mariani; Thomas A White; Christopher Kupitz; Mark Hunter; Mohamed H Abdellatif; Saša Bajt; Valerii Bondar; Austin Echelmeier; Diandra Doppler; Moritz Emons; Matthias Frank; Raimund Fromme; Yaroslav Gevorkov; Gabriele Giovanetti; Man Jiang; Daihyun Kim; Yoonhee Kim; Henry Kirkwood; Anna Klimovskaia; Juraj Knoska; Faisal H M Koua; Romain Letrun; Stella Lisova; Luis Maia; Victoria Mazalova; Domingo Meza; Thomas Michelat; Abbas Ourmazd; Guido Palmer; Marco Ramilli; Robin Schubert; Peter Schwander; Alessandro Silenzi; Jolanta Sztuk-Dambietz; Alexandra Tolstikova; Henry N Chapman; Alexandra Ros; Anton Barty; Petra Fromme; Adrian P Mancuso; Marius Schmidt
Journal:  Nat Methods       Date:  2019-11-18       Impact factor: 47.990

6.  Temperature-jump solution X-ray scattering reveals distinct motions in a dynamic enzyme.

Authors:  Michael C Thompson; Benjamin A Barad; Alexander M Wolff; Hyun Sun Cho; Friedrich Schotte; Daniel M C Schwarz; Philip Anfinrud; James S Fraser
Journal:  Nat Chem       Date:  2019-09-16       Impact factor: 24.427

Review 7.  How Does Bacillus thuringiensis Crystallize Such a Large Diversity of Toxins?

Authors:  Guillaume Tetreau; Elena A Andreeva; Anne-Sophie Banneville; Elke De Zitter; Jacques-Philippe Colletier
Journal:  Toxins (Basel)       Date:  2021-06-26       Impact factor: 4.546

  7 in total

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