Literature DB >> 28571784

Predictive modeling for classification of positive valence system symptom severity from initial psychiatric evaluation records.

Jose D Posada1, Amie J Barda2, Lingyun Shi2, Diyang Xue2, Victor Ruiz2, Pei-Han Kuan3, Neal D Ryan4, Fuchiang Rich Tsui5.   

Abstract

In response to the challenges set forth by the CEGS N-GRID 2016 Shared Task in Clinical Natural Language Processing, we describe a framework to automatically classify initial psychiatric evaluation records to one of four positive valence system severities: absent, mild, moderate, or severe. We used a dataset provided by the event organizers to develop a framework comprised of natural language processing (NLP) modules and 3 predictive models (two decision tree models and one Bayesian network model) used in the competition. We also developed two additional predictive models for comparison purpose. To evaluate our framework, we employed a blind test dataset provided by the 2016 CEGS N-GRID. The predictive scores, measured by the macro averaged-inverse normalized mean absolute error score, from the two decision trees and Naïve Bayes models were 82.56%, 82.18%, and 80.56%, respectively. The proposed framework in this paper can potentially be applied to other predictive tasks for processing initial psychiatric evaluation records, such as predicting 30-day psychiatric readmissions.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Computer-assisted diagnosis; Natural language processing; Psychiatry; Research Domain Criteria (RDoC); Supervised machine learning

Mesh:

Year:  2017        PMID: 28571784      PMCID: PMC5705330          DOI: 10.1016/j.jbi.2017.05.019

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  14 in total

1.  A broad-coverage natural language processing system.

Authors:  C Friedman
Journal:  Proc AMIA Symp       Date:  2000

2.  Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications.

Authors:  Guergana K Savova; James J Masanz; Philip V Ogren; Jiaping Zheng; Sunghwan Sohn; Karin C Kipper-Schuler; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2010 Sep-Oct       Impact factor: 4.497

3.  Risk taking and the adolescent reward system: a potential common link to substance abuse.

Authors:  Sophia Schneider; Jan Peters; Uli Bromberg; Stefanie Brassen; Stephan F Miedl; Tobias Banaschewski; Gareth J Barker; Patricia Conrod; Herta Flor; Hugh Garavan; Andreas Heinz; Bernd Ittermann; Mark Lathrop; Eva Loth; Karl Mann; Jean-Luc Martinot; Frauke Nees; Tomas Paus; Marcella Rietschel; Trevor W Robbins; Michael N Smolka; Rainer Spanagel; Andreas Ströhle; Maren Struve; Gunter Schumann; Christian Büchel
Journal:  Am J Psychiatry       Date:  2011-09-28       Impact factor: 18.112

4.  Cognitive Control and Negative and Positive Valence Systems in the Development of an NIMH RDoC-Based Model for Alcohol Use Disorder.

Authors:  Edén Sánchez; Carlos Cruz-Fuentes
Journal:  Alcohol Clin Exp Res       Date:  2016-01       Impact factor: 3.455

5.  The NIMH Research Domain Criteria Initiative: Background, Issues, and Pragmatics.

Authors:  Michael J Kozak; Bruce N Cuthbert
Journal:  Psychophysiology       Date:  2016-03       Impact factor: 4.016

Review 6.  Abnormal reward functioning across substance use disorders and major depressive disorder: Considering reward as a transdiagnostic mechanism.

Authors:  Arielle R Baskin-Sommers; Dan Foti
Journal:  Int J Psychophysiol       Date:  2015-02-03       Impact factor: 2.997

Review 7.  Text mining applications in psychiatry: a systematic literature review.

Authors:  Adeline Abbe; Cyril Grouin; Pierre Zweigenbaum; Bruno Falissard
Journal:  Int J Methods Psychiatr Res       Date:  2015-07-17       Impact factor: 4.035

Review 8.  Application of the Research Domain Criteria (RDoC) framework to eating disorders: emerging concepts and research.

Authors:  Jennifer E Wildes; Marsha D Marcus
Journal:  Curr Psychiatry Rep       Date:  2015-05       Impact factor: 5.285

9.  Differentiating anxiety and depression in children and adolescents: evidence from event-related brain potentials.

Authors:  Jennifer N Bress; Alexandria Meyer; Greg Hajcak
Journal:  J Clin Child Adolesc Psychol       Date:  2013-07-23

10.  Toward the future of psychiatric diagnosis: the seven pillars of RDoC.

Authors:  Bruce N Cuthbert; Thomas R Insel
Journal:  BMC Med       Date:  2013-05-14       Impact factor: 8.775

View more
  4 in total

1.  A natural language processing challenge for clinical records: Research Domains Criteria (RDoC) for psychiatry.

Authors:  Özlem Uzuner; Amber Stubbs; Michele Filannino
Journal:  J Biomed Inform       Date:  2017-10-16       Impact factor: 6.317

Review 2.  Natural Language Processing for EHR-Based Computational Phenotyping.

Authors:  Zexian Zeng; Yu Deng; Xiaoyu Li; Tristan Naumann; Yuan Luo
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2018-06-25       Impact factor: 3.710

Review 3.  Machine Learning and Natural Language Processing in Mental Health: Systematic Review.

Authors:  Christophe Lemey; Aziliz Le Glaz; Yannis Haralambous; Deok-Hee Kim-Dufor; Philippe Lenca; Romain Billot; Taylor C Ryan; Jonathan Marsh; Jordan DeVylder; Michel Walter; Sofian Berrouiguet
Journal:  J Med Internet Res       Date:  2021-05-04       Impact factor: 5.428

4.  Natural language processing and machine learning of electronic health records for prediction of first-time suicide attempts.

Authors:  Fuchiang R Tsui; Lingyun Shi; Victor Ruiz; Neal D Ryan; Candice Biernesser; Satish Iyengar; Colin G Walsh; David A Brent
Journal:  JAMIA Open       Date:  2021-03-17
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.