Literature DB >> 28565215

RANDOM TREES AND THE COMPARATIVE METHOD: A CAUTIONARY TALE.

Ehab Abouheif1.   

Abstract

One of the toughest problems facing comparative biology is the paucity of robust phylogenetic hypotheses for many taxonomic groups. Martins (1996) proposed a method to analyze comparative data in the absence of a known phylogeny using randomly generated trees. Before applying this method, however, researchers should be aware that (1) parameter estimates derived from this method essentially assume a star phylogeny, and thus, estimate the same evolutionary regression or correlation coefficient as traditional cross-species analyses; and (2) statistical conclusions derived from this method may be so conservative as to mask evolutionary patterns, such as Rensch's rule, and should be interpreted with caution. © 1998 The Society for the Study of Evolution.

Keywords:  Allometry; Rensch's rule; comparative method; independent contrasts; phylogeny; random trees; sexual size dimorphism

Year:  1998        PMID: 28565215     DOI: 10.1111/j.1558-5646.1998.tb01845.x

Source DB:  PubMed          Journal:  Evolution        ISSN: 0014-3820            Impact factor:   3.694


  1 in total

1.  The UniFrac significance test is sensitive to tree topology.

Authors:  Catherine A Lozupone; Rob Knight
Journal:  BMC Bioinformatics       Date:  2015-07-07       Impact factor: 3.169

  1 in total

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