Literature DB >> 28558098

Complex and Dynamic Chromosomal Rearrangements in a Family With Seemingly Non-Mendelian Inheritance of Dopa-Responsive Dystonia.

Katja Lohmann1, Claire Redin2, Holger Tönnies3, Susan B Bressman4, Jose Ignacio Martin Subero3, Karin Wiegers1, Frauke Hinrichs5, Yorck Hellenbroich6, Aleksandar Rakovic1, Deborah Raymond7, Laurie J Ozelius8, Eberhard Schwinger6, Reiner Siebert9, Michael E Talkowski10, Rachel Saunders-Pullman4, Christine Klein1.   

Abstract

Importance: Chromosomal rearrangements are increasingly recognized to underlie neurologic disorders and are often accompanied by additional clinical signs beyond the gene-specific phenotypic spectrum. Objective: To elucidate the causal genetic variant in a large US family with co-occurrence of dopa-responsive dystonia as well as skeletal and eye abnormalities (ie, ptosis, myopia, and retina detachment). Design, Setting, and Participants: We examined 10 members of a family, including 5 patients with dopa-responsive dystonia and skeletal and/or eye abnormalities, from a US tertiary referral center for neurological diseases using multiple conventional molecular methods, including fluorescence in situ hybridization and array comparative genomic hybridization as well as large-insert whole-genome sequencing to survey multiple classes of genomic variations. Of note, there was a seemingly implausible transmission pattern in this family due to a mutation-negative obligate mutation carrier. Main Outcomes and Measures: Genetic diagnosis in affected family members and insight into the formation of large deletions.
Results: Four members were diagnosed with definite and 1 with probable dopa-responsive dystonia. All 5 affected individuals carried a large heterozygous deletion encompassing all 6 exons of GCH1. Additionally, all mutation carriers had congenital ptosis requiring surgery, 4 had myopia, 2 had retinal detachment, and 2 showed skeletal abnormalities of the hands, ie, polydactyly or syndactyly or missing a hand digit. Two individuals were reported to be free of any disease. Analyses revealed complex chromosomal rearrangements on chromosome 14q21-22 in unaffected individuals that triggered the expansion to a larger deletion segregating with affection status. The expansion occurred recurrently, explaining the seemingly non-mendelian inheritance pattern. These rearrangements included a deletion of GCH1, which likely contributes to the dopa-responsive dystonia, as well as a deletion of BMP4 as a potential cause of digital and eye abnormalities. Conclusions and Relevance: Our findings alert neurologists to the importance of clinical red flags, ie, unexpected co-occurrence of clinical features that may point to the presence of chromosomal rearrangements as the primary disease cause. The clinical management and diagnostics of such patients requires an interdisciplinary approach in modern clinical-diagnostic care.

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Year:  2017        PMID: 28558098      PMCID: PMC5710536          DOI: 10.1001/jamaneurol.2017.0666

Source DB:  PubMed          Journal:  JAMA Neurol        ISSN: 2168-6149            Impact factor:   18.302


  29 in total

1.  Diagnostic criteria for dystonia in DYT1 families.

Authors:  S B Bressman; D Raymond; K Wendt; R Saunders-Pullman; D De Leon; S Fahn; L Ozelius; N Risch
Journal:  Neurology       Date:  2002-12-10       Impact factor: 9.910

Review 2.  The detection of large deletions or duplications in genomic DNA.

Authors:  J A L Armour; D E Barton; D J Cockburn; G R Taylor
Journal:  Hum Mutat       Date:  2002-11       Impact factor: 4.878

Review 3.  Methods for routine diagnosis of genomic rearrangements: multiplex PCR-based methods and future perspectives.

Authors:  Laura De Lellis; Maria Cristina Curia; Serena Veschi; Gitana Maria Aceto; Annalisa Morgano; Alessandro Cama
Journal:  Expert Rev Mol Diagn       Date:  2008-01       Impact factor: 5.225

Review 4.  Dopa-responsive dystonia--clinical and genetic heterogeneity.

Authors:  Subhashie Wijemanne; Joseph Jankovic
Journal:  Nat Rev Neurol       Date:  2015-06-23       Impact factor: 42.937

Review 5.  Dopa-responsive dystonia.

Authors:  T G Nygaard; C D Marsden; R C Duvoisin
Journal:  Adv Neurol       Date:  1988

6.  Paired-Duplication Signatures Mark Cryptic Inversions and Other Complex Structural Variation.

Authors:  Harrison Brand; Ryan L Collins; Carrie Hanscom; Jill A Rosenfeld; Vamsee Pillalamarri; Matthew R Stone; Fontina Kelley; Tamara Mason; Lauren Margolin; Stacey Eggert; Elyse Mitchell; Jennelle C Hodge; James F Gusella; Stephan J Sanders; Michael E Talkowski
Journal:  Am J Hum Genet       Date:  2015-06-18       Impact factor: 11.025

7.  High frequency of multiexonic deletion of the GCH1 gene in a Taiwanese cohort of dopa-response dystonia.

Authors:  Yah-Huei Wu-Chou; Tu-Hsueh Yeh; Chuan-Yu Wang; Juei-Jueng Lin; Chin-Chang Huang; Hsiu-Chen Chang; Szu-Chia Lai; Rou-Shayn Chen; Yi-Hsin Weng; Chia-Ling Huang; Chin-Song Lu
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2010-06-05       Impact factor: 3.568

8.  Clinical diagnosis by whole-genome sequencing of a prenatal sample.

Authors:  Michael E Talkowski; Zehra Ordulu; Vamsee Pillalamarri; Carol B Benson; Ian Blumenthal; Susan Connolly; Carrie Hanscom; Naveed Hussain; Shahrin Pereira; Jonathan Picker; Jill A Rosenfeld; Lisa G Shaffer; Louise E Wilkins-Haug; James F Gusella; Cynthia C Morton
Journal:  N Engl J Med       Date:  2012-12-06       Impact factor: 91.245

Review 9.  Recurrent copy number variations as risk factors for neurodevelopmental disorders: critical overview and analysis of clinical implications.

Authors:  Fátima Torres; Mafalda Barbosa; Patrícia Maciel
Journal:  J Med Genet       Date:  2015-10-26       Impact factor: 6.318

10.  Mutations in BMP4 cause eye, brain, and digit developmental anomalies: overlap between the BMP4 and hedgehog signaling pathways.

Authors:  Preeti Bakrania; Maria Efthymiou; Johannes C Klein; Alison Salt; David J Bunyan; Alex Wyatt; Chris P Ponting; Angela Martin; Steven Williams; Victoria Lindley; Joanne Gilmore; Marie Restori; Anthony G Robson; Magella M Neveu; Graham E Holder; J Richard O Collin; David O Robinson; Peter Farndon; Heidi Johansen-Berg; Dianne Gerrelli; Nicola K Ragge
Journal:  Am J Hum Genet       Date:  2008-01-31       Impact factor: 11.025

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  1 in total

1.  Complex structural variants in Mendelian disorders: identification and breakpoint resolution using short- and long-read genome sequencing.

Authors:  Alba Sanchis-Juan; Jonathan Stephens; Courtney E French; Nicholas Gleadall; Karyn Mégy; Christopher Penkett; Olga Shamardina; Kathleen Stirrups; Isabelle Delon; Eleanor Dewhurst; Helen Dolling; Marie Erwood; Detelina Grozeva; Luca Stefanucci; Gavin Arno; Andrew R Webster; Trevor Cole; Topun Austin; Ricardo Garcia Branco; Willem H Ouwehand; F Lucy Raymond; Keren J Carss
Journal:  Genome Med       Date:  2018-12-07       Impact factor: 11.117

  1 in total

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