Literature DB >> 28550741

Exploring syndrome differentiation using non-negative matrix factorization and cluster analysis in patients with atopic dermatitis.

Younghee Yun1, Wonmo Jung2, Hyunho Kim3, Bo-Hyoung Jang4, Min-Hee Kim5, Jiseong Noh6, Seong-Gyu Ko4, Inhwa Choi7.   

Abstract

Syndrome differentiation (SD) results in a diagnostic conclusion based on a cluster of concurrent symptoms and signs, including pulse form and tongue color. In Korea, there is a strong interest in the standardization of Traditional Medicine (TM). In order to standardize TM treatment, standardization of SD should be given priority. The aim of this study was to explore the SD, or symptom clusters, of patients with atopic dermatitis (AD) using non-negative factorization methods and k-means clustering analysis. We screened 80 patients and enrolled 73 eligible patients. One TM dermatologist evaluated the symptoms/signs using an existing clinical dataset from patients with AD. This dataset was designed to collect 15 dermatologic and 18 systemic symptoms/signs associated with AD. Non-negative matrix factorization was used to decompose the original data into a matrix with three features and a weight matrix. The point of intersection of the three coordinates from each patient was placed in three-dimensional space. With five clusters, the silhouette score reached 0.484, and this was the best silhouette score obtained from two to nine clusters. Patients were clustered according to the varying severity of concurrent symptoms/signs. Through the distribution of the null hypothesis generated by 10,000 permutation tests, we found significant cluster-specific symptoms/signs from the confidence intervals in the upper and lower 2.5% of the distribution. Patients in each cluster showed differences in symptoms/signs and severity. In a clinical situation, SD and treatment are based on the practitioners' observations and clinical experience. SD, identified through informatics, can contribute to development of standardized, objective, and consistent SD for each disease.
Copyright © 2017. Published by Elsevier Ltd.

Entities:  

Keywords:  Cluster analysis; Dermatitis; Syndrome differentiation; atopic; k-means cluster analysis; non-negative matrix factorization

Mesh:

Year:  2017        PMID: 28550741     DOI: 10.1016/j.compbiomed.2017.05.023

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


  1 in total

1.  A survey of Korean medicine doctors' clinical practice patterns for autism spectrum disorder: preliminary research for clinical practice guidelines.

Authors:  Jihong Lee; Sun Haeng Lee; Boram Lee; In Jun Yang; Gyu Tae Chang
Journal:  BMC Complement Altern Med       Date:  2018-03-13       Impact factor: 3.659

  1 in total

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