Literature DB >> 28549001

Contribution of Natural Language Processing in Predicting Rehospitalization Risk.

Christopher Norman1, Thu Van Nguyen, Aurélie Névéol.   

Abstract

Entities:  

Mesh:

Year:  2017        PMID: 28549001      PMCID: PMC5510702          DOI: 10.1097/MLR.0000000000000750

Source DB:  PubMed          Journal:  Med Care        ISSN: 0025-7079            Impact factor:   2.983


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Greenwald et al1 propose using free text in patient records to estimate hospital readmission risk. They use expert knowledge to identify 35 groups of phrases indicative of 30-day rehospitalization, and use 16 of these in logistic regression. We believe the use of natural language processing (NLP) for predicting rehospitalization is an interesting approach, and provide suggestions to improve the model.

NLP METHODS

The proposed terms are all n-grams (n≤4) and therefore a subset of simpler bag-of-words,2 which can be extracted with lighter expert workload. Grouping terms to create variables can be done automatically using topic modeling.3 Taking context into account and normalizing abbreviations and word variants, as discussed by the authors, can be done using common-off-the-shelf software such as cTAKES.4 Graph modeling is another document representation for classification that has been shown to have good interpretability by experts.5

COLLINEARITY

The distortion of the coefficients in table 3 and the modest improvements over the baseline suggest that the variables may share the same information. The Pearson correlation coefficients of all variables would help determine whether this is the case.

MODEL EVALUATION

Another concern is that the proposed method is only compared with a baseline of prior hospitalizations. To evaluate the added value of the proposed variables, a stronger baseline could use all available structured data in the patient records that have been shown to have predictive value, that is, age, sex, comorbidity index.6 This also contributes to measuring the true effect of the proposed variables when adjusting for potential confounders.

CONCLUSIONS

The study of rehospitalization risks presents an excellent opportunity to assess the contribution of NLP to predicting important clinical outcomes. With this letter we want to encourage a more thorough evaluation of NLP methods toward this goal.
  5 in total

1.  Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications.

Authors:  Guergana K Savova; James J Masanz; Philip V Ogren; Jiaping Zheng; Sunghwan Sohn; Karin C Kipper-Schuler; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2010 Sep-Oct       Impact factor: 4.497

Review 2.  Risk prediction models for hospital readmission: a systematic review.

Authors:  Devan Kansagara; Honora Englander; Amanda Salanitro; David Kagen; Cecelia Theobald; Michele Freeman; Sunil Kripalani
Journal:  JAMA       Date:  2011-10-19       Impact factor: 56.272

3.  A Novel Model for Predicting Rehospitalization Risk Incorporating Physical Function, Cognitive Status, and Psychosocial Support Using Natural Language Processing.

Authors:  Jeffrey L Greenwald; Patrick R Cronin; Victoria Carballo; Goodarz Danaei; Garry Choy
Journal:  Med Care       Date:  2017-03       Impact factor: 2.983

4.  Subgraph augmented non-negative tensor factorization (SANTF) for modeling clinical narrative text.

Authors:  Yuan Luo; Yu Xin; Ephraim Hochberg; Rohit Joshi; Ozlem Uzuner; Peter Szolovits
Journal:  J Am Med Inform Assoc       Date:  2015-04-09       Impact factor: 4.497

5.  Predicting early psychiatric readmission with natural language processing of narrative discharge summaries.

Authors:  A Rumshisky; M Ghassemi; T Naumann; P Szolovits; V M Castro; T H McCoy; R H Perlis
Journal:  Transl Psychiatry       Date:  2016-10-18       Impact factor: 6.222

  5 in total

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