Literature DB >> 28547780

Advances in molecular engineering of carbohydrate-binding modules.

Silvia Armenta1, Silvia Moreno-Mendieta2, Zaira Sánchez-Cuapio1, Sergio Sánchez1, Romina Rodríguez-Sanoja1.   

Abstract

Carbohydrate-binding modules (CBMs) are non-catalytic domains that are generally appended to carbohydrate-active enzymes. CBMs have a broadly conserved structure that allows recognition of a notable variety of carbohydrates, in both their soluble and insoluble forms, as well as in their alpha and beta conformations and with different types of bonds or substitutions. This versatility suggests a high functional plasticity that is not yet clearly understood, in spite of the important number of studies relating protein structure and function. Several studies have explored the flexibility of these systems by changing or improving their specificity toward substrates of interest. In this review, we examine the molecular strategies used to identify CBMs with novel or improved characteristics. The impact of the spatial arrangement of the functional amino acids of CBMs is discussed in terms of unexpected new functions that are not related to the original biological roles of the enzymes. Proteins 2017; 85:1602-1617.
© 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  carbohydrate binding; molecular evolution; mutation; protein engineering; protein-carbohydrate interaction

Mesh:

Substances:

Year:  2017        PMID: 28547780     DOI: 10.1002/prot.25327

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  15 in total

Review 1.  Prospecting prebiotics, innovative evaluation methods, and their health applications: a review.

Authors:  Ishu Khangwal; Pratyoosh Shukla
Journal:  3 Biotech       Date:  2019-04-25       Impact factor: 2.406

2.  Investigating the role of carbohydrate-binding module 34 in cyclomaltodextrinase from Geobacillus thermopakistaniensis: structural and functional analyses.

Authors:  Iqra Aroob; Maryam Javed; Nasir Ahmad; Mehwish Aslam; Naeem Rashid
Journal:  3 Biotech       Date:  2021-12-23       Impact factor: 2.406

3.  Recombinant Protein Purification using Composite Polyacrylamide-Nanocrystalline Cryogel Monolith Column and Carbohydrate-Binding Module Family 64 as Affinity Tag.

Authors:  Mohsen Danaeifar; Ziba Veisi Malekshahi; Fatemeh Kazemi-Lomedasht; Mohammad Ali Mazlomi
Journal:  Rep Biochem Mol Biol       Date:  2022-07

4.  Characterization and homology modelling of a novel multi-modular and multi-functional Paenibacillus mucilaginosus glycoside hydrolase.

Authors:  Ntsoaki Leticia Mosina; Wolf-Dieter Schubert; Don A Cowan
Journal:  Extremophiles       Date:  2019-08-01       Impact factor: 2.395

5.  Presence of carbohydrate binding modules in extracellular region of class C G-protein coupled receptors (C GPCR): An in silico investigation on sweet taste receptor.

Authors:  Elaheh Kashani-Amin; Amirhossein Sakhteman; Bagher Larijani; Azadeh Ebrahim-Habibi
Journal:  J Biosci       Date:  2019-12       Impact factor: 1.826

6.  A putative novel starch-binding domain revealed by in silico analysis of the N-terminal domain in bacterial amylomaltases from the family GH77.

Authors:  Filip Mareček; Marie Sofie Møller; Birte Svensson; Štefan Janeček
Journal:  3 Biotech       Date:  2021-04-21       Impact factor: 2.406

Review 7.  Strategies and Tactics for the Development of Selective Glycan-Binding Proteins.

Authors:  Elizabeth M Ward; Megan E Kizer; Barbara Imperiali
Journal:  ACS Chem Biol       Date:  2021-01-26       Impact factor: 4.634

8.  Structure of the Streptococcus pyogenes NAD+ Glycohydrolase Translocation Domain and Its Essential Role in Toxin Binding to Oropharyngeal Keratinocytes.

Authors:  Jorge J Velarde; Alessandro Piai; Ian J Lichtenstein; Nicola N Lynskey; James J Chou; Michael R Wessels
Journal:  J Bacteriol       Date:  2021-10-25       Impact factor: 3.476

9.  Extension of the taxonomic coverage of the family GH126 outside Firmicutes and in silico characterization of its non-catalytic terminal domains.

Authors:  Lenka Kerényiová; Štefan Janeček
Journal:  3 Biotech       Date:  2020-09-08       Impact factor: 2.406

10.  Native to designed: microbial -amylases for industrial applications.

Authors:  Si Jie Lim; Siti Nurbaya Oslan
Journal:  PeerJ       Date:  2021-05-18       Impact factor: 2.984

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