Literature DB >> 28547383

Complete nucleotide sequence of a highly divergent cherry-associated luteovirus (ChALV) isolate from peach in South Korea.

Davaajargal Igori1,2, Seungmo Lim2,3, Dasom Baek1,2, In Sook Cho4, Jae Sun Moon5,6.   

Abstract

We determined the complete genome sequence of a highly divergent South Korean (SK) isolate of a cherry-associated luteovirus (ChALV) from peach. The ChALV-SK genome consists of 5,815 nucleotides, and contains five open reading frames (ORFs). A comparative analysis of the full genome showed only 73.1% nucleotide sequence identity with a recently described ChALV from the Czech Republic (CZ). Amino acid similarities of the individual ORFs between ChALV-SK and other luteoviruses range from 17.3 to 92%, which places the new isolate close to the species demarcation value for luteoviruses. Results show our ChALV-SK isolate to be highly diverged from the ChALV-CZ isolate.

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Year:  2017        PMID: 28547383     DOI: 10.1007/s00705-017-3418-x

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  3 in total

Review 1.  Recent Advances on Detection and Characterization of Fruit Tree Viruses Using High-Throughput Sequencing Technologies.

Authors:  Varvara I Maliogka; Angelantonio Minafra; Pasquale Saldarelli; Ana B Ruiz-García; Miroslav Glasa; Nikolaos Katis; Antonio Olmos
Journal:  Viruses       Date:  2018-08-17       Impact factor: 5.048

Review 2.  Is There a "Biological Desert" With the Discovery of New Plant Viruses? A Retrospective Analysis for New Fruit Tree Viruses.

Authors:  Wanying Hou; Shifang Li; Sebastien Massart
Journal:  Front Microbiol       Date:  2020-11-19       Impact factor: 5.640

3.  Complete Genome Sequence of Nectarine stem pitting-associated virus, Isolated from Prunus persica in Cheongdo County, South Korea.

Authors:  Davaajargal Igori; Dasom Baek; San Yeong Kim; Euncheol Seo; Su-Heon Lee; Rae-Dong Jeong; Seung-In Yi; Jin-Jong Bong; Jae Sun Moon
Journal:  Genome Announc       Date:  2017-08-31
  3 in total

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