Literature DB >> 28539437

Spontaneous Mutation at Amino Acid 544 of the Ebola Virus Glycoprotein Potentiates Virus Entry and Selection in Tissue Culture.

John B Ruedas1,2, Jason T Ladner3, Chelsea R Ettinger4, Suryaram Gummuluru4, Gustavo Palacios3, John H Connor1,2.   

Abstract

Ebolaviruses have a surface glycoprotein (GP1,2) that is required for virus attachment and entry into cells. Mutations affecting GP1,2 functions can alter virus growth properties. We generated a recombinant vesicular stomatitis virus encoding Ebola virus Makona variant GP1,2 (rVSV-MAK-GP) and observed emergence of a T544I mutation in the Makona GP1,2 gene during tissue culture passage in certain cell lines. The T544I mutation emerged within two passages when VSV-MAK-GP was grown on Vero E6, Vero, and BS-C-1 cells but not when it was passaged on Huh7 and HepG2 cells. The mutation led to a marked increase in virus growth kinetics and conferred a robust growth advantage over wild-type rVSV-MAK-GP on Vero E6 cells. Analysis of complete viral genomes collected from patients in western Africa indicated that this mutation was not found in Ebola virus clinical samples. However, we observed the emergence of T544I during serial passage of various Ebola Makona isolates on Vero E6 cells. Three independent isolates showed emergence of T544I from undetectable levels in nonpassaged virus or virus passaged once to frequencies of greater than 60% within a single passage, consistent with it being a tissue culture adaptation. Intriguingly, T544I is not found in any Sudan, Bundibugyo, or Tai Forest ebolavirus sequences. Furthermore, T544I did not emerge when we serially passaged recombinant VSV encoding GP1,2 from these ebolaviruses. This report provides experimental evidence that the spontaneous mutation T544I is a tissue culture adaptation in certain cell lines and that it may be unique for the species Zaire ebolavirusIMPORTANCE The Ebola virus (Zaire) species is the most lethal species of all ebolaviruses in terms of mortality rate and number of deaths. Understanding how the Ebola virus surface glycoprotein functions to facilitate entry in cells is an area of intense research. Recently, three groups independently identified a polymorphism in the Ebola glycoprotein (I544) that enhanced virus entry, but they did not agree in their conclusions regarding its impact on pathogenesis. Our findings here address the origins of this polymorphism and provide experimental evidence showing that it is the result of a spontaneous mutation (T544I) specific to tissue culture conditions, suggesting that it has no role in pathogenesis. We further show that this mutation may be unique to the species Zaire ebolavirus, as it does not occur in Sudan, Bundibugyo, and Tai Forest ebolaviruses. Understanding the mechanism behind this mutation can provide insight into functional differences that exist in culture conditions and among ebolavirus glycoproteins.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  Bundibugyo ebolavirus; Ebola virus; Sudan ebolavirus; Tai Forest ebolavirus; adaptation; glycoproteins; membrane fusion; mutation; tissue culture; tissue culture mutation; virus entry

Mesh:

Substances:

Year:  2017        PMID: 28539437      PMCID: PMC5651722          DOI: 10.1128/JVI.00392-17

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  28 in total

1.  Properties of replication-competent vesicular stomatitis virus vectors expressing glycoproteins of filoviruses and arenaviruses.

Authors:  Michael Garbutt; Ryan Liebscher; Victoria Wahl-Jensen; Steven Jones; Peggy Möller; Ralf Wagner; Viktor Volchkov; Hans-Dieter Klenk; Heinz Feldmann; Ute Ströher
Journal:  J Virol       Date:  2004-05       Impact factor: 5.103

2.  Mechanism of Binding to Ebola Virus Glycoprotein by the ZMapp, ZMAb, and MB-003 Cocktail Antibodies.

Authors:  Edgar Davidson; Christopher Bryan; Rachel H Fong; Trevor Barnes; Jennifer M Pfaff; Manu Mabila; Joseph B Rucker; Benjamin J Doranz
Journal:  J Virol       Date:  2015-08-26       Impact factor: 5.103

3.  Fast gapped-read alignment with Bowtie 2.

Authors:  Ben Langmead; Steven L Salzberg
Journal:  Nat Methods       Date:  2012-03-04       Impact factor: 28.547

4.  Structure and function of the complete internal fusion loop from Ebolavirus glycoprotein 2.

Authors:  Sonia M Gregory; Erisa Harada; Binyong Liang; Sue E Delos; Judith M White; Lukas K Tamm
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-20       Impact factor: 11.205

5.  A Polymorphism within the Internal Fusion Loop of the Ebola Virus Glycoprotein Modulates Host Cell Entry.

Authors:  Markus Hoffmann; Lisa Crone; Erik Dietzel; Jennifer Paijo; Mariana González-Hernández; Inga Nehlmeier; Ulrich Kalinke; Stephan Becker; Stefan Pöhlmann
Journal:  J Virol       Date:  2017-04-13       Impact factor: 5.103

6.  Recombinant vesicular stomatitis virus vector mediates postexposure protection against Sudan Ebola hemorrhagic fever in nonhuman primates.

Authors:  Thomas W Geisbert; Kathleen M Daddario-DiCaprio; Kinola J N Williams; Joan B Geisbert; Anders Leung; Friederike Feldmann; Lisa E Hensley; Heinz Feldmann; Steven M Jones
Journal:  J Virol       Date:  2008-04-02       Impact factor: 5.103

7.  Isolates of Zaire ebolavirus from wild apes reveal genetic lineage and recombinants.

Authors:  Tatiana J Wittmann; Roman Biek; Alexandre Hassanin; Pierre Rouquet; Patricia Reed; Philippe Yaba; Xavier Pourrut; Leslie A Real; Jean-Paul Gonzalez; Eric M Leroy
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-17       Impact factor: 11.205

8.  Host-Primed Ebola Virus GP Exposes a Hydrophobic NPC1 Receptor-Binding Pocket, Revealing a Target for Broadly Neutralizing Antibodies.

Authors:  Zachary A Bornholdt; Esther Ndungo; Marnie L Fusco; Shridhar Bale; Andrew I Flyak; James E Crowe; Kartik Chandran; Erica Ollmann Saphire
Journal:  mBio       Date:  2016-02-23       Impact factor: 7.867

9.  Viral genome sequencing by random priming methods.

Authors:  Appolinaire Djikeng; Rebecca Halpin; Ryan Kuzmickas; Jay Depasse; Jeremy Feldblyum; Naomi Sengamalay; Claudio Afonso; Xinsheng Zhang; Norman G Anderson; Elodie Ghedin; David J Spiro
Journal:  BMC Genomics       Date:  2008-01-07       Impact factor: 3.969

10.  Vesicular stomatitis virus-based vaccines protect nonhuman primates against Bundibugyo ebolavirus.

Authors:  Chad E Mire; Joan B Geisbert; Andrea Marzi; Krystle N Agans; Heinz Feldmann; Thomas W Geisbert
Journal:  PLoS Negl Trop Dis       Date:  2013-12-19
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  14 in total

1.  Growth-Adaptive Mutations in the Ebola Virus Makona Glycoprotein Alter Different Steps in the Virus Entry Pathway.

Authors:  John B Ruedas; Catherine E Arnold; Gustavo Palacios; John H Connor
Journal:  J Virol       Date:  2018-09-12       Impact factor: 5.103

Review 2.  Molecular adaptations during viral epidemics.

Authors:  Nash D Rochman; Yuri I Wolf; Eugene V Koonin
Journal:  EMBO Rep       Date:  2022-07-18       Impact factor: 9.071

3.  A Naturally Occurring Polymorphism in the Base of Sudan Virus Glycoprotein Decreases Glycoprotein Stability in a Species-Dependent Manner.

Authors:  Nicholas J Lennemann; Jacob Dillard; Natalie Ruggio; Ashley L Cooney; Grace A Schaack; Robert A Davey; Wendy Maury
Journal:  J Virol       Date:  2021-08-25       Impact factor: 5.103

4.  TIM-1 Augments Cellular Entry of Ebola Virus Species and Mutants, Which Is Blocked by Recombinant TIM-1 Protein.

Authors:  Min Zhang; Xinwei Wang; Linhan Hu; Yuting Zhang; Hang Zheng; Haiyan Wu; Jing Wang; Longlong Luo; He Xiao; Chunxia Qiao; Xinying Li; Weijin Huang; Youchun Wang; Jiannan Feng; Guojiang Chen
Journal:  Microbiol Spectr       Date:  2022-04-06

5.  Analyses of Tissue Culture Adaptation of Human Herpesvirus-6A by Whole Genome Deep Sequencing Redefines the Reference Sequence and Identifies Virus Entry Complex Changes.

Authors:  Joshua G Tweedy; Eric Escriva; Maya Topf; Ursula A Gompels
Journal:  Viruses       Date:  2017-12-31       Impact factor: 5.048

6.  Different effects of two mutations on the infectivity of Ebola virus glycoprotein in nine mammalian species.

Authors:  Yohei Kurosaki; Mahoko Takahashi Ueda; Yusuke Nakano; Jiro Yasuda; Yoshio Koyanagi; Kei Sato; So Nakagawa
Journal:  J Gen Virol       Date:  2018-01-04       Impact factor: 3.891

7.  Ebola virus, but not Marburg virus, replicates efficiently and without required adaptation in snake cells.

Authors:  Greg Fedewa; Sheli R Radoshitzky; Xiǎolì Chī; Lián Dǒng; Xiankun Zeng; Melissa Spear; Nicolas Strauli; Melinda Ng; Kartik Chandran; Mark D Stenglein; Ryan D Hernandez; Peter B Jahrling; Jens H Kuhn; Joseph L DeRisi
Journal:  Virus Evol       Date:  2018-11-28

8.  Ebola Virus Isolation Using Huh-7 Cells has Methodological Advantages and Similar Sensitivity to Isolation Using Other Cell Types and Suckling BALB/c Laboratory Mice.

Authors:  James Logue; Walter Vargas Licona; Timothy K Cooper; Becky Reeder; Russel Byrum; Jing Qin; Nicole Deiuliis Murphy; Yu Cong; Amanda Bonilla; Jennifer Sword; Wade Weaver; Gregory Kocher; Gene G Olinger; Peter B Jahrling; Lisa E Hensley; Richard S Bennett
Journal:  Viruses       Date:  2019-02-16       Impact factor: 5.048

Review 9.  Ebolaviruses: New roles for old proteins.

Authors:  Diego Cantoni; Jeremy S Rossman
Journal:  PLoS Negl Trop Dis       Date:  2018-05-03

10.  Structural and Functional Analysis of the D614G SARS-CoV-2 Spike Protein Variant.

Authors:  Leonid Yurkovetskiy; Xue Wang; Kristen E Pascal; Christopher Tomkins-Tinch; Thomas P Nyalile; Yetao Wang; Alina Baum; William E Diehl; Ann Dauphin; Claudia Carbone; Kristen Veinotte; Shawn B Egri; Stephen F Schaffner; Jacob E Lemieux; James B Munro; Ashique Rafique; Abhi Barve; Pardis C Sabeti; Christos A Kyratsous; Natalya V Dudkina; Kuang Shen; Jeremy Luban
Journal:  Cell       Date:  2020-09-15       Impact factor: 66.850

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