Literature DB >> 28533371

Blue fluorescent amino acid for biological spectroscopy and microscopy.

Mary Rose Hilaire1, Ismail A Ahmed2, Chun-Wei Lin1, Hyunil Jo3, William F DeGrado4, Feng Gai5,6.   

Abstract

Many fluorescent proteins are currently available for biological spectroscopy and imaging measurements, allowing a wide range of biochemical and biophysical processes and interactions to be studied at various length scales. However, in applications where a small fluorescence reporter is required or desirable, the choice of fluorophores is rather limited. As such, continued effort has been devoted to the development of amino acid-based fluorophores that do not require a specific environment and additional time to mature and have a large fluorescence quantum yield, long fluorescence lifetime, good photostability, and an emission spectrum in the visible region. Herein, we show that a tryptophan analog, 4-cyanotryptophan, which differs from tryptophan by only two atoms, is the smallest fluorescent amino acid that meets these requirements and has great potential to enable in vitro and in vivo spectroscopic and microscopic measurements of proteins.

Entities:  

Keywords:  fluorescence probe; fluorescence protein; imaging; unnatural amino acid

Mesh:

Substances:

Year:  2017        PMID: 28533371      PMCID: PMC5468623          DOI: 10.1073/pnas.1705586114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

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Journal:  Biochim Biophys Acta       Date:  1999-12-15

Review 2.  Fluorescence lifetime measurements and biological imaging.

Authors:  Mikhail Y Berezin; Samuel Achilefu
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

3.  Membrane-bound conformation of mastoparan-X, a G-protein-activating peptide.

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Journal:  Biochemistry       Date:  1992-06-23       Impact factor: 3.162

Review 4.  A practical guide to single-molecule FRET.

Authors:  Rahul Roy; Sungchul Hohng; Taekjip Ha
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

Review 5.  Enhancement of protein spectra with tryptophan analogs: fluorescence spectroscopy of protein-protein and protein-nucleic acid interactions.

Authors:  J B Ross; A G Szabo; C W Hogue
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  Efficient asymmetric synthesis of tryptophan analogues having useful photophysical properties.

Authors:  Poulami Talukder; Shengxi Chen; Pablo M Arce; Sidney M Hecht
Journal:  Org Lett       Date:  2014-01-06       Impact factor: 6.005

7.  A genetically encoded fluorescent probe in mammalian cells.

Authors:  Abhishek Chatterjee; Jiantao Guo; Hyun Soo Lee; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2013-08-14       Impact factor: 15.419

8.  Azatryptophans endow proteins with intrinsic blue fluorescence.

Authors:  Sandra Lepthien; Michael G Hoesl; Lars Merkel; Nediljko Budisa
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-14       Impact factor: 11.205

9.  Cyanotryptophans as Novel Fluorescent Probes for Studying Protein Conformational Changes and DNA-Protein Interaction.

Authors:  Poulami Talukder; Shengxi Chen; Basab Roy; Petro Yakovchuk; Michelle M Spiering; Mohammad P Alam; Manikandadas M Madathil; Chandrabali Bhattacharya; Stephen J Benkovic; Sidney M Hecht
Journal:  Biochemistry       Date:  2015-12-16       Impact factor: 3.162

10.  Painting proteins blue: β-(1-azulenyl)-L-alanine as a probe for studying protein-protein interactions.

Authors:  Yurii S Moroz; Wolfgang Binder; Patrik Nygren; Gregory A Caputo; Ivan V Korendovych
Journal:  Chem Commun (Camb)       Date:  2013-01-18       Impact factor: 6.222

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  19 in total

1.  7-Cyanoindole fluorescence as a local hydration reporter: application to probe the microheterogeneity of nine water-organic binary mixtures.

Authors:  Debopreeti Mukherjee; Lilliana I Ortiz Rodriguez; Mary Rose Hilaire; Thomas Troxler; Feng Gai
Journal:  Phys Chem Chem Phys       Date:  2018-01-09       Impact factor: 3.676

2.  Improved Synthesis of 4-Cyanotryptophan and Other Tryptophan Analogues in Aqueous Solvent Using Variants of TrpB from Thermotoga maritima.

Authors:  Christina E Boville; David K Romney; Patrick J Almhjell; Michaela Sieben; Frances H Arnold
Journal:  J Org Chem       Date:  2018-04-27       Impact factor: 4.354

3.  PET and FRET utility of an amino acid pair: tryptophan and 4-cyanotryptophan.

Authors:  Ismail A Ahmed; Jeffrey M Rodgers; Christina Eng; Thomas Troxler; Feng Gai
Journal:  Phys Chem Chem Phys       Date:  2019-06-10       Impact factor: 3.676

4.  Solvent Dependence of Cyanoindole Fluorescence Lifetime.

Authors:  Mary Rose Hilaire; Debopreeti Mukherjee; Thomas Troxler; Feng Gai
Journal:  Chem Phys Lett       Date:  2017-07-18       Impact factor: 2.328

5.  Facile synthesis of a novel genetically encodable fluorescent α-amino acid emitting greenish blue light.

Authors:  Aakash Gupta; Brian P Garreffi; Maolin Guo
Journal:  Chem Commun (Camb)       Date:  2020-09-18       Impact factor: 6.222

6.  4-Cyanoindole-2'-deoxyribonucleoside (4CIN): A Universal Fluorescent Nucleoside Analogue.

Authors:  Kellan T Passow; Daniel A Harki
Journal:  Org Lett       Date:  2018-07-10       Impact factor: 6.005

7.  Synthesis and application of the blue fluorescent amino acid l-4-cyanotryptophan to assess peptide-membrane interactions.

Authors:  Kui Zhang; Ismail A Ahmed; Huong T Kratochvil; William F DeGrado; Feng Gai; Hyunil Jo
Journal:  Chem Commun (Camb)       Date:  2019-04-25       Impact factor: 6.222

8.  Tuning the electronic transition energy of indole via substitution: application to identify tryptophan-based chromophores that absorb and emit visible light.

Authors:  Robert J Micikas; Ismail A Ahmed; Arusha Acharyya; Amos B Smith; Feng Gai
Journal:  Phys Chem Chem Phys       Date:  2021-03-12       Impact factor: 3.676

9.  Exploring long-range proton conduction, the conduction mechanism and inner hydration state of protein biopolymers.

Authors:  Somen Mondal; Yuval Agam; Ramesh Nandi; Nadav Amdursky
Journal:  Chem Sci       Date:  2020-03-11       Impact factor: 9.825

Review 10.  Tryptophan Synthase: Biocatalyst Extraordinaire.

Authors:  Ella Watkins-Dulaney; Sabine Straathof; Frances Arnold
Journal:  Chembiochem       Date:  2020-09-22       Impact factor: 3.164

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