Literature DB >> 28523410

Genomic portrait of population of Jharkhand, India, drawn with 15 autosomal STRs and 17 Y-STRs.

Jahangir Imam1, Romana Reyaz1, Rama Shankar Singh1, Arun Kumar Bapuly1, Pankaj Shrivastava2.   

Abstract

We analysed 15 autosomal STRs in 200 unrelated individuals (102 males and 98 females) and 17 Y-STRs in 102 unrelated males living in Jharkhand, India, to establish parameters of forensic interest. The examined autosomal STRs revealed high combined power of exclusion (CPE) and combined power of discrimination (CPD) as equal to 0.9999 and greater than 0.99999, respectively. The combined probability of match (CPm) and combined paternity index (CPI) for all 15 autosomal STR loci were found to be 5.15 × 10-18 and 6.83 × 105, respectively. A total of 97 unique haplotypes were obtained, of which 93 were observed only once. The haplotype diversity, discrimination capacity and matching probability for 17 Y-STR loci were 0.999, 0.951 and 1.09 × 10-2, respectively. The highest gene diversity values at the single copy locus DYS635 and multi-copy locus DYS385 a/b were 0.785 and 0.823, respectively.

Entities:  

Keywords:  Autosomal STR; DNA; Forensic; Jharkhand; Population data; Y-STR

Mesh:

Year:  2017        PMID: 28523410     DOI: 10.1007/s00414-017-1610-x

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  10 in total

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Journal:  Forensic Sci Int Genet       Date:  2010-02-08       Impact factor: 4.882

2.  Structure and genetic relationship of five populations from central India based on 15 autosomal STR loci.

Authors:  Pankaj Shrivastava; Toshi Jain; Veena Ben Trivedi
Journal:  Ann Hum Biol       Date:  2016-04-21       Impact factor: 1.533

3.  A genetic portrait of Oraon Indian tribe drawn with 15 autosomal and 17 Y chromosomal STR markers.

Authors:  Pankaj Shrivastava; Toshi Jain; V B Trivedi
Journal:  Int J Legal Med       Date:  2016-02-04       Impact factor: 2.686

4.  Polymorphism at 15 short tandem repeat AmpFlSTR Identifiler loci in three aboriginal populations of India: an assessment in human identification.

Authors:  Jheelam Banerjee; R Trivedi; V K Kashyap
Journal:  J Forensic Sci       Date:  2005-09       Impact factor: 1.832

5.  Genotypic polymorphisms at seventeen autosomal short tandem repeat loci in four tribal populations of Andhra Pradesh, India.

Authors:  G Hima Bindu; R Trivedi; V K Kashyap
Journal:  J Forensic Sci       Date:  2005-07       Impact factor: 1.832

6.  Genetic polymorphism at 15 tetrameric short tandem repeat loci in four aboriginal tribal populations of Bengal.

Authors:  Anamika Singh; R Trivedi; V K Kashyap
Journal:  J Forensic Sci       Date:  2006-01       Impact factor: 1.832

7.  Forensic STR profile of two endogamous populations of Madhya Pradesh, India.

Authors:  Bhawna Dubey; P R Meganathan; M Eaaswarkhanth; T S Vasulu; Ikramul Haque
Journal:  Leg Med (Tokyo)       Date:  2008-09-12       Impact factor: 1.376

8.  Genetic variation at 15 autosomal STR loci in Bhil tribal population of Central India.

Authors:  Pankaj Shrivastava; Toshi Jain; Umang Gupta; Veena Ben Trivedi
Journal:  Ann Hum Biol       Date:  2015-04-24       Impact factor: 1.533

9.  Genetic diversity of 15 autosomal short tandem repeats loci using the AmpFLSTR(®) Identifiler™ kit in a Bhil Tribe Population from Gujarat state, India.

Authors:  Ramesh R Chaudhari; M S Dahiya
Journal:  Indian J Hum Genet       Date:  2014-04

10.  Genetic polymorphism study at 15 autosomal locus in central Indian population.

Authors:  Pankaj Shrivastava; Toshi Jain; Veena Ben Trivedi
Journal:  Springerplus       Date:  2015-09-30
  10 in total
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Authors:  Hirak Ranjan Dash; Kamlesh Kaitholia; R K Kumawat; Anil Kumar Singh; Pankaj Shrivastava; Gyaneshwer Chaubey; Surajit Das
Journal:  Sci Rep       Date:  2021-12-01       Impact factor: 4.379

2.  Assessment of Genetic Polymorphisms in the Rewa Population of Central India Using Y-Chromosomal STR Markers.

Authors:  A Mishra; U Gondhali; S Mishra; S K Choudhary
Journal:  Sovrem Tekhnologii Med       Date:  2021-12-28

3.  A study of genomic diversity in populations of Maharashtra, India, inferred from 20 autosomal STR markers.

Authors:  Ashish Badiye; Neeti Kapoor; R K Kumawat; Pankaj Shrivastava; Shivani Dixit; Aditi Mishra; Akansha Dixit; Prachi Kathane; Sudeshna Bag; Vaishnavi Thakre; Kamlesh Kaitholia; Ankit Srivastava; Gyaneshwer Chaubey
Journal:  BMC Res Notes       Date:  2021-02-23
  3 in total

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