Literature DB >> 28522690

Resistance to malaria through structural variation of red blood cell invasion receptors.

Ellen M Leffler1,2, Gavin Band1,2, George B J Busby1, Katja Kivinen2, Quang Si Le1, Geraldine M Clarke1, Kalifa A Bojang3, David J Conway3,4, Muminatou Jallow3,5, Fatoumatta Sisay-Joof3, Edith C Bougouma6, Valentina D Mangano7, David Modiano7, Sodiomon B Sirima6, Eric Achidi8, Tobias O Apinjoh9, Kevin Marsh10,11, Carolyne M Ndila10, Norbert Peshu10, Thomas N Williams10,12, Chris Drakeley13,14, Alphaxard Manjurano13,14,15, Hugh Reyburn13,14, Eleanor Riley14, David Kachala16, Malcolm Molyneux16,17, Vysaul Nyirongo16, Terrie Taylor18,19, Nicole Thornton20, Louise Tilley20, Shane Grimsley20, Eleanor Drury2, Jim Stalker2, Victoria Cornelius1, Christina Hubbart1, Anna E Jeffreys1, Kate Rowlands1, Kirk A Rockett1,2, Chris C A Spencer21, Dominic P Kwiatkowski21,2.   

Abstract

The malaria parasite Plasmodium falciparum invades human red blood cells by a series of interactions between host and parasite surface proteins. By analyzing genome sequence data from human populations, including 1269 individuals from sub-Saharan Africa, we identify a diverse array of large copy-number variants affecting the host invasion receptor genes GYPA and GYPB We find that a nearby association with severe malaria is explained by a complex structural rearrangement involving the loss of GYPB and gain of two GYPB-A hybrid genes, which encode a serologically distinct blood group antigen known as Dantu. This variant reduces the risk of severe malaria by 40% and has recently increased in frequency in parts of Kenya, yet it appears to be absent from west Africa. These findings link structural variation of red blood cell invasion receptors with natural resistance to severe malaria.
Copyright © 2017, American Association for the Advancement of Science.

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Year:  2017        PMID: 28522690      PMCID: PMC5575826          DOI: 10.1126/science.aam6393

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  69 in total

1.  Protter: interactive protein feature visualization and integration with experimental proteomic data.

Authors:  Ulrich Omasits; Christian H Ahrens; Sebastian Müller; Bernd Wollscheid
Journal:  Bioinformatics       Date:  2013-10-24       Impact factor: 6.937

2.  Erythrocytes deficiency in glycophorin resist invasion by the malarial parasite Plasmodium falciparum.

Authors:  G Pasvol; J S Wainscoat; D J Weatherall
Journal:  Nature       Date:  1982-05-06       Impact factor: 49.962

3.  Studies on human red-cell membrane glycophorin A and glycophorin B genes in glycophorin-deficient individuals.

Authors:  C G Tate; M J Tanner; P A Judson; D J Anstee
Journal:  Biochem J       Date:  1989-11-01       Impact factor: 3.857

4.  Glycophorin B is the erythrocyte receptor of Plasmodium falciparum erythrocyte-binding ligand, EBL-1.

Authors:  D C Ghislaine Mayer; Joann Cofie; Lubin Jiang; Daniel L Hartl; Erin Tracy; Juraj Kabat; Laurence H Mendoza; Louis H Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-11       Impact factor: 11.205

5.  Human red blood cell Wright antigens: a genetic and evolutionary perspective on glycophorin A-band 3 interaction.

Authors:  C H Huang; M E Reid; S S Xie; O O Blumenfeld
Journal:  Blood       Date:  1996-05-01       Impact factor: 22.113

6.  Contrasting signatures of selection on the Plasmodium falciparum erythrocyte binding antigen gene family.

Authors:  Federica Verra; Watcharee Chokejindachai; Gareth D Weedall; Spencer D Polley; Tabitha W Mwangi; Kevin Marsh; David J Conway
Journal:  Mol Biochem Parasitol       Date:  2006-06-22       Impact factor: 1.759

7.  Genotype imputation with thousands of genomes.

Authors:  Bryan Howie; Jonathan Marchini; Matthew Stephens
Journal:  G3 (Bethesda)       Date:  2011-11-01       Impact factor: 3.154

8.  Signal transduction by glycophorin A: role of extracellular and cytoplasmic domains in a modulatable process.

Authors:  J A Chasis; M E Reid; R H Jensen; N Mohandas
Journal:  J Cell Biol       Date:  1988-10       Impact factor: 10.539

9.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

10.  Genome-wide and fine-resolution association analysis of malaria in West Africa.

Authors:  Muminatou Jallow; Yik Ying Teo; Kerrin S Small; Kirk A Rockett; Panos Deloukas; Taane G Clark; Katja Kivinen; Kalifa A Bojang; David J Conway; Margaret Pinder; Giorgio Sirugo; Fatou Sisay-Joof; Stanley Usen; Sarah Auburn; Suzannah J Bumpstead; Susana Campino; Alison Coffey; Andrew Dunham; Andrew E Fry; Angela Green; Rhian Gwilliam; Sarah E Hunt; Michael Inouye; Anna E Jeffreys; Alieu Mendy; Aarno Palotie; Simon Potter; Jiannis Ragoussis; Jane Rogers; Kate Rowlands; Elilan Somaskantharajah; Pamela Whittaker; Claire Widden; Peter Donnelly; Bryan Howie; Jonathan Marchini; Andrew Morris; Miguel SanJoaquin; Eric Akum Achidi; Tsiri Agbenyega; Angela Allen; Olukemi Amodu; Patrick Corran; Abdoulaye Djimde; Amagana Dolo; Ogobara K Doumbo; Chris Drakeley; Sarah Dunstan; Jennifer Evans; Jeremy Farrar; Deepika Fernando; Tran Tinh Hien; Rolf D Horstmann; Muntaser Ibrahim; Nadira Karunaweera; Gilbert Kokwaro; Kwadwo A Koram; Martha Lemnge; Julie Makani; Kevin Marsh; Pascal Michon; David Modiano; Malcolm E Molyneux; Ivo Mueller; Michael Parker; Norbert Peshu; Christopher V Plowe; Odile Puijalon; John Reeder; Hugh Reyburn; Eleanor M Riley; Anavaj Sakuntabhai; Pratap Singhasivanon; Sodiomon Sirima; Adama Tall; Terrie E Taylor; Mahamadou Thera; Marita Troye-Blomberg; Thomas N Williams; Michael Wilson; Dominic P Kwiatkowski
Journal:  Nat Genet       Date:  2009-05-24       Impact factor: 38.330

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  60 in total

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Authors:  Amy R Bentley; Shawneequa L Callier; Charles N Rotimi
Journal:  NPJ Genom Med       Date:  2020-02-25       Impact factor: 8.617

Review 2.  The role of the red blood cell in host defence against falciparum malaria: an expanding repertoire of evolutionary alterations.

Authors:  Morgan M Goheen; Susana Campino; Carla Cerami
Journal:  Br J Haematol       Date:  2017-08-23       Impact factor: 6.998

Review 3.  African genetic diversity provides novel insights into evolutionary history and local adaptations.

Authors:  Ananyo Choudhury; Shaun Aron; Dhriti Sengupta; Scott Hazelhurst; Michèle Ramsay
Journal:  Hum Mol Genet       Date:  2018-08-01       Impact factor: 6.150

4.  Common PIEZO1 Allele in African Populations Causes RBC Dehydration and Attenuates Plasmodium Infection.

Authors:  Shang Ma; Stuart Cahalan; Gregory LaMonte; Nathan D Grubaugh; Weizheng Zeng; Swetha E Murthy; Emma Paytas; Ramya Gamini; Viktor Lukacs; Tess Whitwam; Meaghan Loud; Rakhee Lohia; Laurence Berry; Shahid M Khan; Chris J Janse; Michael Bandell; Christian Schmedt; Kai Wengelnik; Andrew I Su; Eric Honore; Elizabeth A Winzeler; Kristian G Andersen; Ardem Patapoutian
Journal:  Cell       Date:  2018-03-22       Impact factor: 41.582

Review 5.  RBC membrane biomechanics and Plasmodium falciparum invasion: probing beyond ligand-receptor interactions.

Authors:  Patrice V Groomes; Usheer Kanjee; Manoj T Duraisingh
Journal:  Trends Parasitol       Date:  2022-01-04

Review 6.  Beyond Hemoglobin: Screening for Malaria Host Factors.

Authors:  Elizabeth S Egan
Journal:  Trends Genet       Date:  2017-12-14       Impact factor: 11.639

7.  First genome-wide association study of non-severe malaria in two birth cohorts in Benin.

Authors:  Jacqueline Milet; Anne Boland; Pierre Luisi; Audrey Sabbagh; Ibrahim Sadissou; Paulin Sonon; Nadia Domingo; Friso Palstra; Laure Gineau; David Courtin; Achille Massougbodji; André Garcia; Jean-François Deleuze; Hervé Perdry
Journal:  Hum Genet       Date:  2019-10-30       Impact factor: 4.132

8.  Defining Blood Group Gene Reference Alleles by Long-Read Sequencing: Proof of Concept in the ACKR1 Gene Encoding the Duffy Antigens.

Authors:  Yann Fichou; Isabelle Berlivet; Gaëlle Richard; Christophe Tournamille; Lilian Castilho; Claude Férec
Journal:  Transfus Med Hemother       Date:  2019-12-11       Impact factor: 3.747

Review 9.  Revisiting the malaria hypothesis: accounting for polygenicity and pleiotropy.

Authors:  Emily R Ebel; Lawrence H Uricchio; Dmitri A Petrov; Elizabeth S Egan
Journal:  Trends Parasitol       Date:  2022-01-19

10.  Improving statistical power in severe malaria genetic association studies by augmenting phenotypic precision.

Authors:  James A Watson; Carolyne M Ndila; Thomas N Williams; Chris C Holmes; Nicholas J White; Sophie Uyoga; Alexander Macharia; Gideon Nyutu; Shebe Mohammed; Caroline Ngetsa; Neema Mturi; Norbert Peshu; Benjamin Tsofa; Kirk Rockett; Stije Leopold; Hugh Kingston; Elizabeth C George; Kathryn Maitland; Nicholas Pj Day; Arjen M Dondorp; Philip Bejon
Journal:  Elife       Date:  2021-07-06       Impact factor: 8.140

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