Literature DB >> 28512228

Fast folding and slow unfolding of a resurrected Precambrian protein.

Adela M Candel1, M Luisa Romero-Romero1, Gloria Gamiz-Arco1, Beatriz Ibarra-Molero1, Jose M Sanchez-Ruiz2.   

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Year:  2017        PMID： 28512228      PMCID： PMC5448177          DOI： 10.1073/pnas.1703227114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  10 in total

Review 1.  The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding.

Authors:  A R Fersht; A Matouschek; L Serrano
Journal:  J Mol Biol       Date:  1992-04-05       Impact factor: 5.469

2.  Transient folding intermediates characterized by protein engineering.

Authors:  A Matouschek; J T Kellis; L Serrano; M Bycroft; A R Fersht
Journal:  Nature       Date:  1990-08-02       Impact factor: 49.962

3.  Are there equilibrium intermediate states in the urea-induced unfolding of hen egg-white lysozyme?

Authors:  B Ibarra-Molero; J M Sanchez-Ruiz
Journal:  Biochemistry       Date:  1997-08-05       Impact factor: 3.162

4.  Evidence for the principle of minimal frustration in the evolution of protein folding landscapes.

Authors:  Franco O Tzul; Daniel Vasilchuk; George I Makhatadze
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-14       Impact factor: 11.205

5.  Natural selection for kinetic stability is a likely origin of correlations between mutational effects on protein energetics and frequencies of amino acid occurrences in sequence alignments.

Authors:  Raquel Godoy-Ruiz; Fernando Ariza; David Rodriguez-Larrea; Raul Perez-Jimenez; Beatriz Ibarra-Molero; Jose M Sanchez-Ruiz
Journal:  J Mol Biol       Date:  2006-07-31       Impact factor: 5.469

6.  Conservation of protein structure over four billion years.

Authors:  Alvaro Ingles-Prieto; Beatriz Ibarra-Molero; Asuncion Delgado-Delgado; Raul Perez-Jimenez; Julio M Fernandez; Eric A Gaucher; Jose M Sanchez-Ruiz; Jose A Gavira
Journal:  Structure       Date:  2013-08-08       Impact factor: 5.006

7.  Proline isomerization-independent accumulation of an early intermediate and heterogeneity of the folding pathways of a mixed alpha/beta protein, Escherichia coli thioredoxin.

Authors:  R E Georgescu; J H Li; M E Goldberg; M L Tasayco; A F Chaffotte
Journal:  Biochemistry       Date:  1998-07-14       Impact factor: 3.162

8.  Single-molecule paleoenzymology probes the chemistry of resurrected enzymes.

Authors:  Raul Perez-Jimenez; Alvaro Inglés-Prieto; Zi-Ming Zhao; Inmaculada Sanchez-Romero; Jorge Alegre-Cebollada; Pallav Kosuri; Sergi Garcia-Manyes; T Joseph Kappock; Masaru Tanokura; Arne Holmgren; Jose M Sanchez-Ruiz; Eric A Gaucher; Julio M Fernandez
Journal:  Nat Struct Mol Biol       Date:  2011-04-03       Impact factor: 15.369

9.  Mutational studies on resurrected ancestral proteins reveal conservation of site-specific amino acid preferences throughout evolutionary history.

Authors:  Valeria A Risso; Fadia Manssour-Triedo; Asunción Delgado-Delgado; Rocio Arco; Alicia Barroso-delJesus; Alvaro Ingles-Prieto; Raquel Godoy-Ruiz; Jose A Gavira; Eric A Gaucher; Beatriz Ibarra-Molero; Jose M Sanchez-Ruiz
Journal:  Mol Biol Evol       Date:  2014-11-12       Impact factor: 16.240

10.  Selection for Protein Kinetic Stability Connects Denaturation Temperatures to Organismal Temperatures and Provides Clues to Archaean Life.

Authors:  M Luisa Romero-Romero; Valeria A Risso; Sergio Martinez-Rodriguez; Eric A Gaucher; Beatriz Ibarra-Molero; Jose M Sanchez-Ruiz
Journal:  PLoS One       Date:  2016-06-02       Impact factor: 3.240
  10 in total
  5 in total

1.  Reply to Candel et al.: Evidence for evolutionary conservation of folding kinetics in the thioredoxin protein family.

Authors:  Franco O Tzul; Daniel Vasilchuk; George I Makhatadze
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-16       Impact factor: 11.205

Review 2.  Evolution, folding, and design of TIM barrels and related proteins.

Authors:  Sergio Romero-Romero; Sina Kordes; Florian Michel; Birte Höcker
Journal:  Curr Opin Struct Biol       Date:  2021-01-13       Impact factor: 6.809

3.  Isolated domains of recombinant human apo-metallothionein 1A are folded at neutral pH: a denaturant and heat-induced unfolding study using ESI-MS.

Authors:  Gordon W Irvine; Natalie Korkola; Martin J Stillman
Journal:  Biosci Rep       Date:  2018-07-18       Impact factor: 3.840

4.  Engineering and screening of novel β-1,3-xylanases with desired hydrolysate type by optimized ancestor sequence reconstruction and data mining.

Authors:  Bo Zeng; ShuYan Zhao; Rui Zhou; YanHong Zhou; WenHui Jin; ZhiWei Yi; GuangYa Zhang
Journal:  Comput Struct Biotechnol J       Date:  2022-06-27       Impact factor: 6.155

5.  Non-conservation of folding rates in the thioredoxin family reveals degradation of ancestral unassisted-folding.

Authors:  Gloria Gamiz-Arco; Valeria A Risso; Adela M Candel; Alvaro Inglés-Prieto; Maria L Romero-Romero; Eric A Gaucher; Jose A Gavira; Beatriz Ibarra-Molero; Jose M Sanchez-Ruiz
Journal:  Biochem J       Date:  2019-12-12       Impact factor: 3.857
  5 in total

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