Literature DB >> 28510014

Biosensor binding data and its applicability to the determination of active concentration.

Robert Karlsson1.   

Abstract

Protein concentration data are required for understanding protein interactions and are a prerequisite for the determination of affinity and kinetic properties. It is vital for the judgment of protein quality and for monitoring the effect of therapeutic agents. Protein concentration values are typically obtained by comparison to a standard and derived from a standard curve. The use of a protein standard is convenient, but may not give reliable results if samples and standards behave differently. In other cases, a standard preparation may not be available and has to be established and validated. Using surface plasmon resonance (SPR) biosensors, an alternative concentration method is possible. This method is called calibration-free concentration analysis (CFCA); it generates active concentration data directly and without the use of a standard. The active concentration of a protein is defined through its interaction with its binding partner. This concentration can differ from the total protein concentration if some protein fraction is incapable of binding. If a protein has several different binding sites, active concentration data can be established for each binding site using site-specific interaction partners. This review will focus on CFCA analysis. It will reiterate the theory of CFCA and describe how CFCA has been applied in different research segments. The major part of the review will, however, try to set expectations on CFCA and discuss how CFCA can be further developed for absolute and relative concentration measurements.

Keywords:  Biomarker; CFCA; Protein quality; SPR; Simulation; Vaccine

Year:  2016        PMID: 28510014      PMCID: PMC5418478          DOI: 10.1007/s12551-016-0219-5

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  37 in total

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Authors:  G Zeder-Lutz; A Benito; M H Van Regenmortel
Journal:  J Mol Recognit       Date:  1999 Sep-Oct       Impact factor: 2.137

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Journal:  Mol Pharmacol       Date:  2005-08-12       Impact factor: 4.436

3.  Stable trimerization of recombinant rabies virus glycoprotein ectodomain is required for interaction with the p75NTR receptor.

Authors:  Ludmilla Sissoëff; Mohamed Mousli; Patrick England; Christine Tuffereau
Journal:  J Gen Virol       Date:  2005-09       Impact factor: 3.891

4.  Integrated fluid handling system for biomolecular interaction analysis.

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Journal:  Anal Chem       Date:  1991-10-15       Impact factor: 6.986

5.  Extending the range of rate constants available from BIACORE: interpreting mass transport-influenced binding data.

Authors:  D G Myszka; X He; M Dembo; T A Morton; B Goldstein
Journal:  Biophys J       Date:  1998-08       Impact factor: 4.033

6.  Reproducibility crisis: Blame it on the antibodies.

Authors:  Monya Baker
Journal:  Nature       Date:  2015-05-21       Impact factor: 49.962

7.  Evaluation of calibration-free concentration analysis provided by Biacore™ systems.

Authors:  Ewa Pol; Håkan Roos; Francis Markey; Fredrik Elwinger; Alan Shaw; Robert Karlsson
Journal:  Anal Biochem       Date:  2016-07-09       Impact factor: 3.365

8.  Biosensor-based characterization of serum antibodies during development of an anti-IgE immunotherapeutic against allergy and asthma.

Authors:  Ewa Pol; Robert Karlsson; Håkan Roos; Asa Jansson; Bingze Xu; Anita Larsson; Tanja Jarhede; Gary Franklin; Alexis Fuentes; Stefan Persson
Journal:  J Mol Recognit       Date:  2007 Jan-Feb       Impact factor: 2.137

9.  Malaria vaccine candidate antigen targeting the pre-erythrocytic stage of Plasmodium falciparum produced at high level in plants.

Authors:  Nadja Voepel; Alexander Boes; Güven Edgue; Veronique Beiss; Stephanie Kapelski; Andreas Reimann; Stefan Schillberg; Gabriele Pradel; Rolf Fendel; Matthias Scheuermayer; Holger Spiegel; Rainer Fischer
Journal:  Biotechnol J       Date:  2014-10-10       Impact factor: 4.677

10.  Exploring the dynamic range of the kinetic exclusion assay in characterizing antigen-antibody interactions.

Authors:  Christine Bee; Yasmina N Abdiche; Donna M Stone; Sierra Collier; Kevin C Lindquist; Alanna C Pinkerton; Jaume Pons; Arvind Rajpal
Journal:  PLoS One       Date:  2012-04-30       Impact factor: 3.240

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Authors:  Lucie Hartmann; Thomas Botzanowski; Mathieu Galibert; Magali Jullian; Eric Chabrol; Gabrielle Zeder-Lutz; Valérie Kugler; Johann Stojko; Jean-Marc Strub; Gilles Ferry; Lukasz Frankiewicz; Karine Puget; Renaud Wagner; Sarah Cianférani; Jean A Boutin
Journal:  Protein Sci       Date:  2019-08-29       Impact factor: 6.725

2.  A review and summary of the contents of biophysical reviews volume 8, 2016.

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Journal:  Biophys Rev       Date:  2017-02-07

Review 3.  Foreword to 'Quantitative and analytical relations in biochemistry'-a special issue in honour of Donald J. Winzor's 80th birthday.

Authors:  Damien Hall; Stephen E Harding
Journal:  Biophys Rev       Date:  2016-11-04

4.  Surrogate potency assays: Comparison of binding profiles complements dose response curves for unambiguous assessment of relative potencies.

Authors:  Robert Karlsson; Veronica Fridh; Åsa Frostell
Journal:  J Pharm Anal       Date:  2017-12-21

5.  Multi-temperature experiments to ease analysis of heterogeneous binder solutions by surface plasmon resonance biosensing.

Authors:  Olivier Henry; Gregory De Crescenzo; Jimmy Gaudreault; Yves Durocher
Journal:  Sci Rep       Date:  2022-08-24       Impact factor: 4.996

6.  Multiplexed, High-Sensitivity Measurements of Antibody Affinity Using Interferometric Reflectance Imaging Sensor.

Authors:  Allison M Marn; James Needham; Elisa Chiodi; M Selim Ünlü
Journal:  Biosensors (Basel)       Date:  2021-11-27
  6 in total

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