Literature DB >> 28502641

Insights in luteovirid structural biology guided by chemical cross-linking and high resolution mass spectrometry.

Mariko M Alexander1, Jared P Mohr2, Stacy L DeBlasio3, Juan D Chavez2, Veronique Ziegler-Graff4, Veronique Brault5, James E Bruce2, Michelle Cilia Heck6.   

Abstract

Interactions among plant pathogenic viruses in the family Luteoviridae and their plant hosts and insect vectors are governed by the topology of the viral capsid, which is the sole vehicle for long distance movement of the viral genome. Previous application of a mass spectrometry-compatible cross-linker to preparations of the luteovirid Potato leafroll virus (PLRV; Luteoviridae: Polerovirus) revealed a detailed network of interactions between viral structural proteins and enabled generation of the first cross-linking guided coat protein models. In this study, we extended application of chemical cross-linking technology to the related Turnip yellows virus (TuYV; Luteoviridae: Polerovirus). Remarkably, all cross-links found between sites in the viral coat protein found for TuYV were also found in PLRV. Guided by these data, we present two models for the TuYV coat protein trimer, the basic structural unit of luteovirid virions. Additional cross-links found between the TuYV coat protein and a site in the viral protease domain suggest a possible role for the luteovirid protease in regulating the structural biology of these viruses. Published by Elsevier B.V.

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Year:  2017        PMID: 28502641     DOI: 10.1016/j.virusres.2017.05.005

Source DB:  PubMed          Journal:  Virus Res        ISSN: 0168-1702            Impact factor:   3.303


  6 in total

Review 1.  Chemical cross-linking with mass spectrometry: a tool for systems structural biology.

Authors:  Juan D Chavez; James E Bruce
Journal:  Curr Opin Chem Biol       Date:  2018-08-30       Impact factor: 8.822

2.  Systems structural biology measurements by in vivo cross-linking with mass spectrometry.

Authors:  Juan D Chavez; Jared P Mohr; Martin Mathay; Xuefei Zhong; Andrew Keller; James E Bruce
Journal:  Nat Protoc       Date:  2019-07-03       Impact factor: 13.491

Review 3.  Applications and advancements of FT-ICR-MS for interactome studies.

Authors:  Juan D Chavez; Sung-Gun Park; Jared P Mohr; James E Bruce
Journal:  Mass Spectrom Rev       Date:  2020-12-08       Impact factor: 10.946

Review 4.  MASS SPECTROMETRY IN VIROLOGICAL SCIENCES.

Authors:  Aleksandra Milewska; Joanna Ner-Kluza; Agnieszka Dabrowska; Anna Bodzon-Kulakowska; Krzysztof Pyrc; Piotr Suder
Journal:  Mass Spectrom Rev       Date:  2019-12-25       Impact factor: 9.011

Review 5.  Top-Down and Bottom-Up Proteomics Methods to Study RNA Virus Biology.

Authors:  Yogy Simanjuntak; Kira Schamoni-Kast; Alice Grün; Charlotte Uetrecht; Pietro Scaturro
Journal:  Viruses       Date:  2021-04-13       Impact factor: 5.048

6.  Combining Transient Expression and Cryo-EM to Obtain High-Resolution Structures of Luteovirid Particles.

Authors:  Matthew J Byrne; John F C Steele; Emma L Hesketh; Miriam Walden; Rebecca F Thompson; George P Lomonossoff; Neil A Ranson
Journal:  Structure       Date:  2019-10-11       Impact factor: 5.006

  6 in total

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