Literature DB >> 28501625

Circular RNAs roll into the regulatory network of plants.

Quan-Feng Li1, Yu-Chan Zhang1, Yue-Qin Chen2, Yang Yu3.   

Abstract

As a novel class of endogenous non-coding RNAs, circular RNAs (circRNAs) have become a new research hotspot in recent years. The wide distribution of circRNAs in different plant species has been proven. Furthermore, circRNAs show significant tissue-specific expression patterns in plant development and are responsive to a variety of biotic and abiotic stresses, indicating that circRNAs might have important biological functions in plant development. Here, we summarize the current knowledge of plant circRNAs in recent years and discuss views and perspectives on the possible regulatory roles of plant circRNAs, including the function of miRNA sponges, regulating the expression of their parental genes or linear mRNAs, translating into peptides or proteins and responses to different stresses. These advances have sculpted a framework of plant circRNAs and provide new insights for functional RNA regulation research in the future.
Copyright © 2017 Elsevier Inc. All rights reserved.

Keywords:  Expression pattern; Function; Plant; Protein coding potential; Regulatory network; circRNAs

Mesh:

Substances:

Year:  2017        PMID: 28501625     DOI: 10.1016/j.bbrc.2017.05.061

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  13 in total

1.  Characterization and Cloning of Grape Circular RNAs Identified the Cold Resistance-Related Vv-circATS1.

Authors:  Zhen Gao; Jing Li; Meng Luo; Hui Li; Qiuju Chen; Lei Wang; Shiren Song; Liping Zhao; Wenping Xu; Caixi Zhang; Shiping Wang; Chao Ma
Journal:  Plant Physiol       Date:  2019-04-08       Impact factor: 8.340

2.  Hsa_circ_0000467 promotes cancer progression and serves as a diagnostic and prognostic biomarker for gastric cancer.

Authors:  Jun Lu; Peng-Yang Zhang; Jian-Wei Xie; Jia-Bin Wang; Jian-Xian Lin; Qi-Yue Chen; Long-Long Cao; Chang-Ming Huang; Ping Li; Chao-Hui Zheng
Journal:  J Clin Lab Anal       Date:  2018-11-21       Impact factor: 2.352

Review 3.  Drought tolerance improvement in Solanum lycopersicum: an insight into "OMICS" approaches and genome editing.

Authors:  Sima Taheri; Saikat Gantait; Parisa Azizi; Purabi Mazumdar
Journal:  3 Biotech       Date:  2022-02-08       Impact factor: 2.406

4.  Heat stress alters genome-wide profiles of circular RNAs in Arabidopsis.

Authors:  Ting Pan; Xiuqiang Sun; Yangxuan Liu; Hui Li; Guangbin Deng; Honghui Lin; Songhu Wang
Journal:  Plant Mol Biol       Date:  2017-11-24       Impact factor: 4.076

5.  Circular RNA architecture and differentiation during leaf bud to young leaf development in tea (Camellia sinensis).

Authors:  Wei Tong; Jie Yu; Yan Hou; Fangdong Li; Qiying Zhou; Chaoling Wei; Jeffrey L Bennetzen
Journal:  Planta       Date:  2018-08-20       Impact factor: 4.116

6.  Transcriptome-Wide Identification and Characterization of Potato Circular RNAs in Response to Pectobacterium carotovorum Subspecies brasiliense Infection.

Authors:  Ran Zhou; Yongxing Zhu; Jiao Zhao; Zhengwu Fang; Shuping Wang; Junliang Yin; Zhaohui Chu; Dongfang Ma
Journal:  Int J Mol Sci       Date:  2017-12-27       Impact factor: 5.923

7.  NGS Methodologies and Computational Algorithms for the Prediction and Analysis of Plant Circular RNAs.

Authors:  Laura Carmen Terrón-Camero; Eduardo Andrés-León
Journal:  Methods Mol Biol       Date:  2021

8.  Systematic Identification and Analysis of Light-Responsive Circular RNA and Co-expression Networks in Lettuce (Lactuca sativa).

Authors:  Zhenchao Yang; Zhao Yang; Yingge Xie; Qi Liu; Yanhao Mei; Yongjun Wu
Journal:  G3 (Bethesda)       Date:  2020-07-07       Impact factor: 3.154

9.  Whole-transcriptome RNA sequencing reveals the global molecular responses and ceRNA regulatory network of mRNAs, lncRNAs, miRNAs and circRNAs in response to copper toxicity in Ziyang Xiangcheng (Citrus junos Sieb. Ex Tanaka).

Authors:  Xing-Zheng Fu; Xiao-Yong Zhang; Jie-Ya Qiu; Xue Zhou; Meng Yuan; Yi-Zhong He; Chang-Pin Chun; Li Cao; Li-Li Ling; Liang-Zhi Peng
Journal:  BMC Plant Biol       Date:  2019-11-21       Impact factor: 4.215

10.  GreenCircRNA: a database for plant circRNAs that act as miRNA decoys.

Authors:  Jingjing Zhang; Zhiqiang Hao; Shuwei Yin; Guanglin Li
Journal:  Database (Oxford)       Date:  2020-01-01       Impact factor: 3.451

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