Literature DB >> 28497977

Effect of Amino Acid Substitutions Within the V3 Region of HIV-1 CRF01_AE on Interaction with CCR5-Coreceptor.

Sayamon Hongjaisee1, Martine Braibant2, Francis Barin2, Nicole Ngo-Giang-Huong1,3, Wasna Sirirungsi1, Tanawan Samleerat1.   

Abstract

Specific amino acids within the V3 loop of HIV-1 CRF01_AE envelope glycoprotein that are involved in the interaction with CCR5/CXCR4 coreceptors, are not well characterized. We generated V3 mutants using polymerase chain reaction (PCR)-based site-directed mutagenesis of HIV-1 CRF01_AE R5-env plasmids at specific positions. Mutant viruses were produced by env-pseudotyped virus assay, tested for coreceptor usage using U373.R5 and U373.X4 cells, and viral entry was assessed with luciferase activity measurement. All viruses, harboring either single or double mutations, used the CCR5 coreceptor. However, those containing a single substitution at positions 7, 11, 18, and 32 and those with mutations at positions 5/32 and 18/32 had reduced infectivity. Only virus with arginine substitution at position 11 seemed to be involved in CXCR4 coreceptor usage. Our results suggest that some V3 positions may be necessary for the binding to coreceptor, but not for the switch of coreceptor usage.

Entities:  

Keywords:  CCR5; CRF01_AE; HIV-1; V3; coreceptor usage

Mesh:

Substances:

Year:  2017        PMID: 28497977      PMCID: PMC5576193          DOI: 10.1089/AID.2017.0044

Source DB:  PubMed          Journal:  AIDS Res Hum Retroviruses        ISSN: 0889-2229            Impact factor:   2.205


  31 in total

1.  Minimal requirements for the human immunodeficiency virus type 1 V3 domain to support the syncytium-inducing phenotype: analysis by single amino acid substitution.

Authors:  J J De Jong; A De Ronde; W Keulen; M Tersmette; J Goudsmit
Journal:  J Virol       Date:  1992-11       Impact factor: 5.103

2.  Improved prediction of HIV‐1 coreceptor usage with sequence information from the second hypervariable loop of gp120.

Authors:  Alexander Thielen; Nadine Sichtig; Rolf Kaiser; Jeffrey Lam; P Richard Harrigan; Thomas Lengauer
Journal:  J Infect Dis       Date:  2010-11-01       Impact factor: 5.226

3.  Conserved changes in envelope function during human immunodeficiency virus type 1 coreceptor switching.

Authors:  Cristina Pastore; Rebecca Nedellec; Alejandra Ramos; Oliver Hartley; John L Miamidian; Jacqueline D Reeves; Donald E Mosier
Journal:  J Virol       Date:  2007-05-16       Impact factor: 5.103

4.  A new classification for HIV-1.

Authors:  E A Berger; R W Doms; E M Fenyö; B T Korber; D R Littman; J P Moore; Q J Sattentau; H Schuitemaker; J Sodroski; R A Weiss
Journal:  Nature       Date:  1998-01-15       Impact factor: 49.962

5.  HIV-1 CRF01_AE coreceptor usage prediction using kernel methods based logistic model trees.

Authors:  Watshara Shoombuatong; Sayamon Hongjaisee; Francis Barin; Jeerayut Chaijaruwanich; Tanawan Samleerat
Journal:  Comput Biol Med       Date:  2012-07-21       Impact factor: 4.589

6.  Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule.

Authors:  R A Fouchier; M Groenink; N A Kootstra; M Tersmette; H G Huisman; F Miedema; H Schuitemaker
Journal:  J Virol       Date:  1992-05       Impact factor: 5.103

7.  Molecular determinants of HIV-1 subtype C coreceptor transition from R5 to R5X4.

Authors:  Hong Zhang; Damien C Tully; Tiejun Zhang; Hideaki Moriyama; Jesse Thompson; Charles Wood
Journal:  Virology       Date:  2010-08-24       Impact factor: 3.616

8.  The CD4 (T4) antigen is an essential component of the receptor for the AIDS retrovirus.

Authors:  A G Dalgleish; P C Beverley; P R Clapham; D H Crawford; M F Greaves; R A Weiss
Journal:  Nature       Date:  1984 Dec 20-1985 Jan 2       Impact factor: 49.962

9.  Alterations in HIV-1 gp120 V3 region are necessary but not sufficient for coreceptor switching in CRF07_BC in China.

Authors:  Lei Zhang; Liying Ma; Zheng Wang; Yan Wang; Jing Zhang; Haining Wang; Yiming Shao
Journal:  PLoS One       Date:  2014-03-27       Impact factor: 3.240

10.  HIV-1 tropism determination using a phenotypic Env recombinant viral assay highlights overestimation of CXCR4-usage by genotypic prediction algorithms for CRF01_AE and CRF02_AG [corrected].

Authors:  Martin Mulinge; Morgane Lemaire; Jean-Yves Servais; Arkadiusz Rybicki; Daniel Struck; Eveline Santos da Silva; Chris Verhofstede; Yolanda Lie; Carole Seguin-Devaux; Jean-Claude Schmit; Danielle Perez Bercoff
Journal:  PLoS One       Date:  2013-05-08       Impact factor: 3.240

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  3 in total

1.  Novel small synthetic HIV-1 V3 crown variants: CCR5 targeting ligands.

Authors:  Anju Krishnan Anitha; Pratibha Narayanan; Neethu Ajayakumar; Krishnankutty Chandrika Sivakumar; Kesavakurup Santhosh Kumar
Journal:  J Biochem       Date:  2022-09-05       Impact factor: 3.241

2.  Contribution of the gp120 V3 loop to envelope glycoprotein trimer stability in primate immunodeficiency viruses.

Authors:  Dane Bowder; Haley Hollingsead; Kate Durst; Duoyi Hu; Wenzhong Wei; Joshua Wiggins; Halima Medjahed; Andrés Finzi; Joseph Sodroski; Shi-Hua Xiang
Journal:  Virology       Date:  2018-06-21       Impact factor: 3.616

3.  Common evolutionary features of the envelope glycoprotein of HIV-1 in patients belonging to a transmission chain.

Authors:  Maxime Beretta; Julie Migraine; Alain Moreau; Asma Essat; Cécile Goujard; Marie-Laure Chaix; Aurélie Drouin; Mélanie Bouvin-Pley; Laurence Meyer; Francis Barin; Martine Braibant
Journal:  Sci Rep       Date:  2020-10-07       Impact factor: 4.379

  3 in total

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