Literature DB >> 28493204

Analysis of molecular and (di)atomic dual-descriptor functions and matrices.

Diego R Alcoba1,2, Ofelia B Oña3, Alicia Torre4, Luis Lain4, Patrick Bultinck5.   

Abstract

In this work, the dual-descriptor is studied in matrix form [Formula: see text] and both coordinates condensed to atoms, resulting in atomic and diatomic (or where applicable, bond) condensed single values. This double partitioning method of the dual-descriptor matrix is proposed within the Hirshfeld-I atoms-in-molecule framework although it is easily extended to other atoms-in-molecules methods. Diagonalizing the resulting atomic and bond dual-descriptor matrices gives eigenvalues and eigenvectors describing the reactivity of atoms and bonds. The dual-descriptor function is the diagonal element of the underlying matrix. The extra information contained in the atom and bond resolution is highlighted and the effect of choosing either the fragment of molecular response or response of molecular fragment approach is quantified. Graphical Abstract Atom and bond condensed dual descriptor matrices and functions are derived from molecular ones using Hirshfeld-I atoms in molecules weight functions.

Keywords:  Atoms in molecules; Dual-descriptor; Frontier molecular orbital

Year:  2017        PMID: 28493204     DOI: 10.1007/s00894-017-3334-8

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  16 in total

1.  Conceptual density functional theory.

Authors:  P Geerlings; F De Proft; W Langenaeker
Journal:  Chem Rev       Date:  2003-05       Impact factor: 60.622

2.  Influence of electron correlation and degeneracy on the Fukui matrix and extension of frontier molecular orbital theory to correlated quantum chemical methods.

Authors:  Patrick Bultinck; Dimitri Van Neck; Guillaume Acke; Paul W Ayers
Journal:  Phys Chem Chem Phys       Date:  2012-01-16       Impact factor: 3.676

3.  Bond Fukui functions as descriptor of the electron density reorganization in π conjugated systems.

Authors:  M Gonzalez-Suarez; Arie Aizman; Jorge Soto-Delgado; R Contreras
Journal:  J Org Chem       Date:  2011-12-06       Impact factor: 4.354

4.  Partitioning of the molecular density matrix over atoms and bonds.

Authors:  Diederik Vanfleteren; Dimitri Van Neck; Patrick Bultinck; Paul W Ayers; Michel Waroquier
Journal:  J Chem Phys       Date:  2010-04-28       Impact factor: 3.488

5.  How to Compute the Fukui Matrix and Function for Systems with (Quasi-)Degenerate States.

Authors:  Patrick Bultinck; Carlos Cardenas; Patricio Fuentealba; Paul A Johnson; Paul W Ayers
Journal:  J Chem Theory Comput       Date:  2014-01-14       Impact factor: 6.006

6.  Critical analysis and extension of the Hirshfeld atoms in molecules.

Authors:  Patrick Bultinck; Christian Van Alsenoy; Paul W Ayers; Ramon Carbó-Dorca
Journal:  J Chem Phys       Date:  2007-04-14       Impact factor: 3.488

7.  Critical thoughts on computing atom condensed Fukui functions.

Authors:  Patrick Bultinck; Stijn Fias; Christian Van Alsenoy; Paul W Ayers; Ramon Carbó-Dorca
Journal:  J Chem Phys       Date:  2007-07-21       Impact factor: 3.488

8.  Bond Fukui indices: comparison of frozen molecular orbital and finite differences through Mulliken populations.

Authors:  Patrick Bultinck; Sofie Van Damme; Andrés Cedillo
Journal:  J Comput Chem       Date:  2013-08-12       Impact factor: 3.376

9.  Reactivity indicators for degenerate states in the density-functional theoretic chemical reactivity theory.

Authors:  Carlos Cárdenas; Paul W Ayers; Andrés Cedillo
Journal:  J Chem Phys       Date:  2011-05-07       Impact factor: 3.488

10.  Conceptual DFT: the chemical relevance of higher response functions.

Authors:  P Geerlings; F De Proft
Journal:  Phys Chem Chem Phys       Date:  2008-03-13       Impact factor: 3.676

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