Literature DB >> 28489428

A Single-Molecule View of Genome Editing Proteins: Biophysical Mechanisms for TALEs and CRISPR/Cas9.

Luke Cuculis1, Charles M Schroeder1,2.   

Abstract

Exciting new advances in genome engineering have unlocked the potential to radically alter the treatment of human disease. In this review, we discuss the application of single-molecule techniques to uncover the mechanisms behind two premier classes of genome editing proteins: transcription activator-like effector nucleases (TALENs) and the clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated system (Cas). These technologies have facilitated a striking number of gene editing applications in a variety of organisms; however, we are only beginning to understand the molecular mechanisms governing the DNA editing properties of these systems. Here, we discuss the DNA search and recognition process for TALEs and Cas9 that have been revealed by recent single-molecule experiments.

Entities:  

Keywords:  CRISPR/Cas9; DNA search; TALEN; genome editing; single molecule

Mesh:

Substances:

Year:  2017        PMID: 28489428     DOI: 10.1146/annurev-chembioeng-060816-101603

Source DB:  PubMed          Journal:  Annu Rev Chem Biomol Eng        ISSN: 1947-5438            Impact factor:   11.059


  4 in total

Review 1.  NMR-based investigations into target DNA search processes of proteins.

Authors:  Junji Iwahara; Levani Zandarashvili; Catherine A Kemme; Alexandre Esadze
Journal:  Methods       Date:  2018-05-10       Impact factor: 3.608

2.  Divalent cations promote TALE DNA-binding specificity.

Authors:  Luke Cuculis; Chuankai Zhao; Zhanar Abil; Huimin Zhao; Diwakar Shukla; Charles M Schroeder
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

Review 3.  Discrete-state stochastic kinetic models for target DNA search by proteins: Theory and experimental applications.

Authors:  Junji Iwahara; Anatoly B Kolomeisky
Journal:  Biophys Chem       Date:  2020-12-10       Impact factor: 2.352

4.  Dynamics of Staphylococcus aureus Cas9 in DNA target Association and Dissociation.

Authors:  Siqi Zhang; Qian Zhang; Xi-Miao Hou; Lijuan Guo; Fangzhu Wang; Lulu Bi; Xia Zhang; Hai-Hong Li; Fengcai Wen; Xu-Guang Xi; Xingxu Huang; Bin Shen; Bo Sun
Journal:  EMBO Rep       Date:  2020-08-13       Impact factor: 8.807

  4 in total

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