Literature DB >> 28484051

Noncanonical Translation Initiation Comes of Age.

Paul Babitzke1, Michael O'Connor2.   

Abstract

The canonical translation initiation mechanism involves base pairing between the mRNA and 16S rRNA. However, a variety of identified mechanisms deviate from this conventional route. Beck and Janssen (J Bacteriol 199:e00091-17, 2017, https://doi.org/10.1128/JB.00091-17) have recently described another noncanonical mode of translation initiation. Here, we describe how this process differs from previously reported mechanisms, with the hope that it will foster increased awareness of the diversity of regulatory mechanisms that await discovery.
Copyright © 2017 American Society for Microbiology.

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Year:  2017        PMID: 28484051      PMCID: PMC5494744          DOI: 10.1128/JB.00295-17

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  25 in total

1.  Translation initiation in Escherichia coli: sequences within the ribosome-binding site.

Authors:  S Ringquist; S Shinedling; D Barrick; L Green; J Binkley; G D Stormo; L Gold
Journal:  Mol Microbiol       Date:  1992-05       Impact factor: 3.501

2.  Analysis of SD sequences in completed microbial genomes: non-SD-led genes are as common as SD-led genes.

Authors:  Bill Chang; Saman Halgamuge; Sen-Lin Tang
Journal:  Gene       Date:  2006-03-30       Impact factor: 3.688

Review 3.  Dealing with stable structures at ribosome binding sites: bacterial translation and ribosome standby.

Authors:  Cecilia Unoson; E Gerhart H Wagner
Journal:  RNA Biol       Date:  2007-11-29       Impact factor: 4.652

4.  Novel Translation Initiation Regulation Mechanism in Escherichia coli ptrB Mediated by a 5'-Terminal AUG.

Authors:  Heather J Beck; Gary R Janssen
Journal:  J Bacteriol       Date:  2017-06-27       Impact factor: 3.490

5.  Enhancement of translation by the epsilon element is independent of the sequence of the 460 region of 16S rRNA.

Authors:  M O'Connor; A E Dahlberg
Journal:  Nucleic Acids Res       Date:  2001-04-01       Impact factor: 16.971

Review 6.  The critical role of RNA processing and degradation in the control of gene expression.

Authors:  Cecília M Arraiano; José M Andrade; Susana Domingues; Inês B Guinote; Michal Malecki; Rute G Matos; Ricardo N Moreira; Vânia Pobre; Filipa P Reis; Margarida Saramago; Inês J Silva; Sandra C Viegas
Journal:  FEMS Microbiol Rev       Date:  2010-06-24       Impact factor: 16.408

7.  70S-scanning initiation is a novel and frequent initiation mode of ribosomal translation in bacteria.

Authors:  Hiroshi Yamamoto; Daniela Wittek; Romi Gupta; Bo Qin; Takuya Ueda; Roland Krause; Kaori Yamamoto; Renate Albrecht; Markus Pech; Knud H Nierhaus
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-17       Impact factor: 11.205

8.  CsrA activates flhDC expression by protecting flhDC mRNA from RNase E-mediated cleavage.

Authors:  Alexander V Yakhnin; Carol S Baker; Christopher A Vakulskas; Helen Yakhnin; Igor Berezin; Tony Romeo; Paul Babitzke
Journal:  Mol Microbiol       Date:  2013-01-11       Impact factor: 3.501

9.  Leaderless genes in bacteria: clue to the evolution of translation initiation mechanisms in prokaryotes.

Authors:  Xiaobin Zheng; Gang-Qing Hu; Zhen-Su She; Huaiqiu Zhu
Journal:  BMC Genomics       Date:  2011-07-12       Impact factor: 3.969

10.  5'-Terminal AUGs in Escherichia coli mRNAs with Shine-Dalgarno Sequences: Identification and Analysis of Their Roles in Non-Canonical Translation Initiation.

Authors:  Heather J Beck; Ian M C Fleming; Gary R Janssen
Journal:  PLoS One       Date:  2016-07-28       Impact factor: 3.240

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  3 in total

1.  Characterization of the internal translation initiation region in monoclonal antibodies expressed in Escherichia coli.

Authors:  Erik M Leith; William B O'Dell; Na Ke; Colleen McClung; Mehmet Berkmen; Christina Bergonzo; Robert G Brinson; Zvi Kelman
Journal:  J Biol Chem       Date:  2019-10-11       Impact factor: 5.157

2.  Long-term effects of the proline-rich antimicrobial peptide Oncocin112 on the Escherichia coli translation machinery.

Authors:  Yanyu Zhu; James C Weisshaar; Mainak Mustafi
Journal:  J Biol Chem       Date:  2020-07-28       Impact factor: 5.157

Review 3.  Regulation of Leaderless mRNA Translation in Bacteria.

Authors:  Lorenzo Eugenio Leiva; Assaf Katz
Journal:  Microorganisms       Date:  2022-03-28
  3 in total

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