Literature DB >> 28483405

Quasispecies characteristics in mother-to-child transmission of hepatitis B virus by next-generation sequencing.

Guifeng Yang1, Zhihua Liu2, Juncheng Yang2, Kangxian Luo2, Ying Xu2, Haitang He2, Qunfang Fu2, Shouyi Yu3, Zhanhui Wang4.   

Abstract

OBJECTIVES: To identify within-host quasispecies characteristics of hepatitis B virus (HBV) in mothers and children infected via mother-to-child transmission (MTCT).
METHODS: Using next-generation sequencing (NGS), we analyzed sequences within the non-overlapping pre-core/core (pre-C/C) gene in 37 mother-child pairs.
RESULTS: Phylogenetic and Highlighter analyses suggested that both a single strain and multiple distinct strains may be transmitted in MTCT of HBV. However, analysis of reassembled viral sequences revealed a relatively narrow distribution of variants in children, which was confirmed by a lower viral diversity in children than that in mothers. New closely related variants with combinations of two to five high-frequency mutations were observed in seven children with elevated ALT levels; the new variants out-competed the transmitted maternal variants to become the dominant strains in five of them. Furthermore, 30 mutations with a frequency >1% of all viruses within-host were present in those children; the mutations caused 19 amino-acid substitutions. Interestingly, almost all were located within the well-known T-cell or B-cell epitopes.
CONCLUSIONS: There are restrictive changes that occur in the early stages of chronic HBV infection through MTCT with different clinical consequences. These data might have important implications for future investigations of interrelated immunopathogenesis and therapeutic strategies.
Copyright © 2017 The British Infection Association. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Hepatitis B virus; Mother-to-child transmission; Mutations; Next-generation sequencing; Quasispecies

Mesh:

Substances:

Year:  2017        PMID: 28483405     DOI: 10.1016/j.jinf.2017.04.012

Source DB:  PubMed          Journal:  J Infect        ISSN: 0163-4453            Impact factor:   6.072


  6 in total

1.  Clinical implication and viral mutation in basal core promoter/pre-core of hepatitis B virus C/D recombinant.

Authors:  Hua Li; Qilu She; Yu Liu; Yuehe Ding; Shenghua Shi; Jijie Li; Hongkai Wu; Zhanhui Wang
Journal:  Hepatol Int       Date:  2018-07-24       Impact factor: 6.047

2.  Horizontal Transmission of Hepatitis B Virus From Mother to Child Due to Immune Escape Despite Immunoprophylaxis.

Authors:  Jamil N Kanji; Robert E D Penner; Elizabeth Giles; Karin Goodison; Steven R Martin; Eric Marinier; Carla Osiowy
Journal:  J Pediatr Gastroenterol Nutr       Date:  2019-05       Impact factor: 2.839

Review 3.  Insights From Deep Sequencing of the HBV Genome-Unique, Tiny, and Misunderstood.

Authors:  Anna L McNaughton; Valentina D'Arienzo; M Azim Ansari; Sheila F Lumley; Margaret Littlejohn; Peter Revill; Jane A McKeating; Philippa C Matthews
Journal:  Gastroenterology       Date:  2018-09-27       Impact factor: 22.682

4.  Characterization and Clinical Significance of Natural Variability in Hepatitis B Virus Reverse Transcriptase in Treatment-Naive Chinese Patients by Sanger Sequencing and Next-Generation Sequencing.

Authors:  Ya Fu; Yongbin Zeng; Tianbin Chen; Huijuan Chen; Ni Lin; Jinpiao Lin; Xiaofeng Liu; Er Huang; Songhang Wu; Shu Wu; Siyi Xu; Long Wang; Qishui Ou
Journal:  J Clin Microbiol       Date:  2019-07-26       Impact factor: 5.948

5.  The dynamic changes of HBV quasispecies diversity in infancy after immunoprophylaxis failure: a prospective cohort study.

Authors:  Yi Li; Yiwei Xiao; Lili Li; Yarong Song; Xiangjun Zhai; Jianxun Liu; Zhongping Duan; Ling Yan; Feng Ding; Jia Liu; Liguo Zhu; Jie Jiang; Huaibin Zou; Lingxiang Li; Caihong Liang; Jie Wang; Jie Li
Journal:  Virol J       Date:  2021-11-29       Impact factor: 4.099

6.  Accurate quantification of within- and between-host HBV evolutionary rates requires explicit transmission chain modelling.

Authors:  Bram Vrancken; Marc A Suchard; Philippe Lemey
Journal:  Virus Evol       Date:  2017-10-06
  6 in total

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