| Literature DB >> 28481906 |
Chengxu Dong1,2, Meixiang Gao1,2, Chuanwei Guo1,2, Lin Lin1,2, Donghui Wu3, Limin Zhang1,2.
Abstract
Metacommunity theory provides an understanding of how ecological processes regulate local community assemblies. However, few field studies have evaluated the underlying mechanisms of a metacommunity on a small scale through revealing the relative roles of spatial and environmental filtering in structuring local community composition. Based on a spatially explicit sampling design in 2012 and 2013, this study aims to evaluate the underlying processes of a soil mite metacommunity on a small spatial scale (50 m) in a temperate deciduous forest located at the Maoershan Ecosystem Research Station, Northeast China. Moran's eigenvector maps (MEMs) were used to model independent spatial variables. The relative importance of spatial (including trend variables, i.e., geographical coordinates, and broad- and fine-scale spatial variables) and environmental factors in driving the soil mite metacommunity was determined by variation partitioning. Mantel and partial Mantel tests and a redundancy analysis (RDA) were also used to identify the relative contributions of spatial and environmental variables. The results of variation partitioning suggested that the relatively large and significant variance was a result of spatial variables (including broad- and fine-scale spatial variables and trend), indicating the importance of dispersal limitation and autocorrelation processes. The significant contribution of environmental variables was detected in 2012 based on a partial Mantel test, and soil moisture and soil organic matter were especially important for the soil mite metacommunity composition in both years. The study suggested that the soil mite metacommunity was primarily regulated by dispersal limitation due to broad-scale and neutral biotic processes at a fine-scale and that environmental filtering might be of subordinate importance. In conclusion, a combination of metacommunity perspectives between neutral and species sorting theories was suggested to be important in the observed structure of the soil mite metacommunity at the studied small scale.Entities:
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Year: 2017 PMID: 28481906 PMCID: PMC5421772 DOI: 10.1371/journal.pone.0176828
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Species and individuals of soil mite metacommunities in 2012 and 2013.
| 2012 | 2013 | |||||||
|---|---|---|---|---|---|---|---|---|
| Species | Individuals | Percentage (%) | Coefficient of variation (%) | Frequency | Individuals | Percentage (%) | Coefficient of variation (%) | Frequency |
| 809 | 4.98 | 109.67 | E | 263 | 3.16 | 171.08 | C | |
| 1 568 | 9.66 | 83.82 | E | 784 | 9.41 | 106.87 | E | |
| Epicriidae sp. | 869 | 5.35 | 114.04 | E | 493 | 5.92 | 131.09 | E |
| 1 487 | 9.16 | 124.33 | E | 675 | 8.10 | 133.04 | D | |
| 1 042 | 6.42 | 104.63 | E | 535 | 6.42 | 71.80 | E | |
| 1 428 | 8.79 | 103.20 | E | 812 | 9.75 | 114.45 | D | |
| 709 | 4.37 | 94.05 | E | 447 | 5.37 | 98.03 | D | |
| 3 677 | 22.64 | 66.54 | E | 1 663 | 19.96 | 49.98 | E | |
| 785 | 4.83 | 140.84 | E | 447 | 5.37 | 98.03 | D | |
| 403 | 2.48 | 103.89 | D | 197 | 2.36 | 302.27 | C | |
| 627 | 3.86 | 129.02 | D | 352 | 4.23 | 144.82 | D | |
| Oribatida sp. | 548 | 3.37 | 123.67 | E | 294 | 3.53 | 130.45 | D |
| 660 | 4.06 | 90.37 | E | 310 | 3.72 | 128.46 | C | |
| Prostigmata sp. | 319 | 1.96 | 209.37 | C | 152 | 1.82 | 266.12 | B |
| 735 | 4.53 | 87.12 | E | 466 | 5.59 | 97.08 | D | |
| 225 | 1.39 | 144.69 | C | 180 | 2.16 | 154.05 | C | |
| 283 | 1.74 | 168.02 | D | 243 | 2.92 | 143.67 | C | |
| 63 | 0.39 | 319.56 | A | 18 | 0.22 | 320.76 | A | |
| Trombidiidae sp. | 3 | 0.02 | 817.15 | A | NF | NF | ||
a In 2012, a soil mite metacommunity was collected using square soil cores with 15 × 15 cm2 and 10 cm depth. In 2013, a soil mite metacommunity was collected using cylindrical soil cores and a soil auger with a 7-cm diameter and 10 cm depth.
b Raunkiaer’s frequency class. A: 1–20%; B: 21–40%; C: 41–60%; D: 61–80%; E: 81–100%.
c NF represents not found.
Fig 1Variation partitioning (%) for the soil mite metacommunity estimated by partial redundancy analysis (pRDA).
Fraction [a] means that variation explained by the purely environmental variables. Fraction [b] indicates that variation explained by the purely trend variables (geographical coordinates). Fraction [c] represents that variation explained by purely broad-scale MEMs. Fraction [d] means that variation explained by purely fine-scale MEMs. Fraction [g] is the common that was jointly explained by the environmental variables and broad-scale MEMs. [l] is the common fraction that was jointly explained by the environmental factors, trend variables and broad-scale MEMs. Fraction [h+k+n+o] means the common fraction that was jointly explained by the environmental factors and fine-scale MEMs. The small negative values were not labeled. * P<0.05. ** P<0.01. *** P<0.001.
Simple and partial Mantel tests of soil mite metacommunity dissimilarity against spatial and environmental distances (999 permutations).
| 2012 | 2013 | |||
|---|---|---|---|---|
| Mantel/Partial Mantel tests | ||||
| Environment | -0.003 | 0.53 | 0.02 | 0.34 |
| Space | 0.11 | <0.001 | 0.15 | <0.001 |
| Environment|Space | 0.11 | 0.04 | 0.04 | 0.25 |
| Space|Environment | 0.05 | 0.12 | 0.05 | 0.13 |
a Soil mite community dissimilarity with environmental distance, controlling for spatial distance.
b Soil mite community dissimilarity with spatial distance, controlling for environmental distance.
* P<0.05.
*** P<0.001.
The effect of environmental factors on the soil mite metacommunity structures analyzed by redundancy analysis and Monte Carlo permutation test (999 permutations)
| Factor | 2012 | 2013 | ||
|---|---|---|---|---|
| PC1 | 0.14 | <0.001 | 0.11 | <0.001 |
| PC2 | 0.01 | 0.61 | 0.01 | 0.43 |
| PC3 | 0.06 | 0.03 | 0.14 | <0.001 |
| PC4 | 0.04 | 0.07 | 0.07 | 0.02 |
a PC indicates each of the factors that were obtained from the PCA for each of the data sets.
* P<0.05.
*** P<0.001.