Literature DB >> 28480699

Right-Handed Helical Foldamers Consisting of De Novo d-AApeptides.

Peng Teng1, Ning Ma1, Darrell Cole Cerrato1, Fengyu She1, Timothy Odom1, Xiang Wang2, Li-June Ming1, Arjan van der Vaart1, Lukasz Wojtas1, Hai Xu2, Jianfeng Cai1.   

Abstract

New types of foldamer scaffolds are formidably challenging to design and synthesize, yet highly desirable as structural mimics of peptides/proteins with a wide repertoire of functions. In particular, the development of peptidomimetic helical foldamers holds promise for new biomaterials, catalysts, and drug molecules. Unnatural l-sulfono-γ-AApeptides were recently developed and shown to have potential applications in both biomedical and material sciences. However, d-sulfono-γ-AApeptides, the enantiomers of l-sulfono-γ-AApeptides, have never been studied due to the lack of high-resolution three-dimensional structures to guide structure-based design. Herein, we report the first synthesis and X-ray crystal structures of a series of 2:1 l-amino acid/d-sulfono-γ-AApeptide hybrid foldamers, and elucidate their folded conformation at the atomic level. Single-crystal X-ray crystallography indicates that this class of oligomers folds into well-defined right-handed helices with unique helical parameters. The helical structures were consistent with data obtained from solution 2D NMR, CD studies, and molecular dynamics simulations. Our findings are expected to inspire the structure-based design of this type of unique folding biopolymers for biomaterials and biomedical applications.

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Year:  2017        PMID: 28480699      PMCID: PMC5885761          DOI: 10.1021/jacs.7b03007

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  39 in total

1.  Unique α,β- and α,α,β,β-peptide foldamers based on cis-β-aminocyclopentanecarboxylic acid.

Authors:  Łukasz Berlicki; Ludwig Pilsl; Edit Wéber; István M Mándity; Chiara Cabrele; Tamás A Martinek; Ferenc Fülöp; Oliver Reiser
Journal:  Angew Chem Int Ed Engl       Date:  2012-01-26       Impact factor: 15.336

2.  Condensation approach to aliphatic oligourea foldamers: helices with N-(pyrrolidin-2-ylmethyl)ureido junctions.

Authors:  Juliette Fremaux; Lucile Fischer; Thomas Arbogast; Brice Kauffmann; Gilles Guichard
Journal:  Angew Chem Int Ed Engl       Date:  2011-10-04       Impact factor: 15.336

3.  Chimeric (alpha/beta + alpha)-peptide ligands for the BH3-recognition cleft of Bcl-XL: critical role of the molecular scaffold in protein surface recognition.

Authors:  Jack D Sadowsky; Margaret A Schmitt; Hee-Seung Lee; Naoki Umezawa; Shaomeng Wang; York Tomita; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2005-08-31       Impact factor: 15.419

4.  Simple, helical peptoid analogs of lung surfactant protein B.

Authors:  Shannon L Seurynck; James A Patch; Annelise E Barron
Journal:  Chem Biol       Date:  2005-01

5.  Design of peptidic foldamer helices: a stereochemical patterning approach.

Authors:  István M Mándity; Edit Wéber; Tamás A Martinek; Gábor Olajos; Gábor K Tóth; Elemér Vass; Ferenc Fülöp
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

6.  γ-AApeptides: Design, Structure, and Applications.

Authors:  Yan Shi; Peng Teng; Peng Sang; Fengyu She; Lulu Wei; Jianfeng Cai
Journal:  Acc Chem Res       Date:  2016-02-22       Impact factor: 22.384

7.  A double-stranded beta-helix with antiparallel chains in a crystalline oligo-L-D-peptide.

Authors:  E Benedetti; B Di Blasio; C Pedone; G P Lorenzi; L Tomasic; V Gramlich
Journal:  Nature       Date:  1979-12-06       Impact factor: 49.962

8.  Extraordinarily robust polyproline type I peptoid helices generated via the incorporation of α-chiral aromatic N-1-naphthylethyl side chains.

Authors:  Joseph R Stringer; J Aaron Crapster; Ilia A Guzei; Helen E Blackwell
Journal:  J Am Chem Soc       Date:  2011-09-13       Impact factor: 15.419

9.  Differential impact of β and γ residue preorganization on α/β/γ-peptide helix stability in water.

Authors:  Young-Hee Shin; David E Mortenson; Kenneth A Satyshur; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2013-05-23       Impact factor: 15.419

10.  Triangular prism-shaped β-peptoid helices as unique biomimetic scaffolds.

Authors:  Jonas S Laursen; Pernille Harris; Peter Fristrup; Christian A Olsen
Journal:  Nat Commun       Date:  2015-05-06       Impact factor: 14.919

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  15 in total

1.  De Novo Left-Handed Synthetic Peptidomimetic Foldamers.

Authors:  Fengyu She; Peng Teng; Alfredo Peguero-Tejada; Minghui Wang; Ning Ma; Timothy Odom; Mi Zhou; Erald Gjonaj; Lukasz Wojtas; Arjan van der Vaart; Jianfeng Cai
Journal:  Angew Chem Int Ed Engl       Date:  2018-07-03       Impact factor: 15.336

2.  Rational Design and Synthesis of Right-Handed d-Sulfono-γ-AApeptide Helical Foldamers as Potent Inhibitors of Protein-Protein Interactions.

Authors:  Peng Sang; Yan Shi; Pirada Higbee; Minghui Wang; Sami Abdulkadir; Junhao Lu; Gary Daughdrill; Jiandong Chen; Jianfeng Cai
Journal:  J Org Chem       Date:  2020-08-02       Impact factor: 4.354

3.  Aggregation-Induced Emissive and Circularly Polarized Homogeneous Sulfono-γ-AApeptide Foldamers.

Authors:  Yan Shi; Peng Sang; Guangqiang Yin; Ruixuan Gao; Xiao Liang; Robert Brzozowski; Timothy Odom; Prahathees Eswara; Youxuan Zheng; Xiaopeng Li; Jianfeng Cai
Journal:  Adv Opt Mater       Date:  2020-04-20       Impact factor: 9.926

4.  Impact of Backbone Pattern and Residue Substitution on Helicity in α/β/γ-Peptides.

Authors:  Young-Hee Shin; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2018-01-19       Impact factor: 15.419

5.  Inhibition of β-catenin/B cell lymphoma 9 protein-protein interaction using α-helix-mimicking sulfono-γ-AApeptide inhibitors.

Authors:  Peng Sang; Min Zhang; Yan Shi; Chunpu Li; Sami Abdulkadir; Qi Li; Haitao Ji; Jianfeng Cai
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-14       Impact factor: 11.205

6.  Orthogonal Halogen-Bonding-Driven 3D Supramolecular Assembly of Right-Handed Synthetic Helical Peptides.

Authors:  Peng Teng; Geoffrey M Gray; Mengmeng Zheng; Sylvia Singh; Xiaopeng Li; Lukasz Wojtas; Arjan van der Vaart; Jianfeng Cai
Journal:  Angew Chem Int Ed Engl       Date:  2019-04-30       Impact factor: 15.336

7.  Differential Effects of β3 - versus β2 -Amino Acid Residues on the Helicity and Recognition Properties of Bim BH3-Derived α/β-Peptides.

Authors:  Geoffrey A Eddinger; Samuel H Gellman
Journal:  Angew Chem Int Ed Engl       Date:  2018-09-20       Impact factor: 15.336

8.  Sulfono-γ-AA modified peptides that inhibit HIV-1 fusion.

Authors:  Olapeju Bolarinwa; Meng Zhang; Erin Mulry; Min Lu; Jianfeng Cai
Journal:  Org Biomol Chem       Date:  2018-10-31       Impact factor: 3.876

9.  Sulfono-γ-AApeptides as Helical Mimetics: Crystal Structures and Applications.

Authors:  Peng Sang; Yan Shi; Bo Huang; Songyi Xue; Timothy Odom; Jianfeng Cai
Journal:  Acc Chem Res       Date:  2020-09-17       Impact factor: 22.384

10.  Potential Foldamers Based on an ortho-Terphenyl Amino Acid.

Authors:  Adam F Kleman; Deseree L Dufek; Theodore L Fobe; Darrell R McCaslin; Brian P Cary; Michael R Shirts; Samuel H Gellman
Journal:  Org Lett       Date:  2021-06-02       Impact factor: 6.072

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