Literature DB >> 28475293

Synonymous mutation in TP53 results in a cryptic splice site affecting its DNA-binding site in an adolescent with two primary sarcomas.

Frances Austin1, Usua Oyarbide1, Gita Massey1, Margaret Grimes2, Seth J Corey1,3.   

Abstract

Pathologic variants in TP53 are known risk factors for the development of cancer. We report a 17-year-old male who presented with two primary sarcomas. Germline sequencing revealed a novel TP53 c.672 G>A mutation. Sequencing revealed wild-type TP53 in the parents, and there was no history of cancer in first-degree relatives. This de novo synonymous germline mutation results in a 5' cryptic splice site that is bound by U1, resulting in a shift of the splice site by 5 base pairs. The frame shift results in a truncated protein at residue 246, which disrupts the DNA-binding domain of p53.
© 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  Li-Fraumeni syndrome; sarcoma; splicing

Mesh:

Substances:

Year:  2017        PMID: 28475293      PMCID: PMC5937697          DOI: 10.1002/pbc.26584

Source DB:  PubMed          Journal:  Pediatr Blood Cancer        ISSN: 1545-5009            Impact factor:   3.167


  14 in total

Review 1.  Sarcomas in TP53 germline mutation carriers: a review of the IARC TP53 database.

Authors:  Simona Ognjanovic; Magali Olivier; Tracy L Bergemann; Pierre Hainaut
Journal:  Cancer       Date:  2011-08-11       Impact factor: 6.860

2.  p53 regulates the transcription of its Delta133p53 isoform through specific response elements contained within the TP53 P2 internal promoter.

Authors:  V Marcel; V Vijayakumar; L Fernández-Cuesta; H Hafsi; C Sagne; A Hautefeuille; M Olivier; P Hainaut
Journal:  Oncogene       Date:  2010-03-01       Impact factor: 9.867

3.  Are there low-penetrance TP53 Alleles? evidence from childhood adrenocortical tumors.

Authors:  J M Varley; G McGown; M Thorncroft; L A James; G P Margison; G Forster; D G Evans; M Harris; A M Kelsey; J M Birch
Journal:  Am J Hum Genet       Date:  1999-10       Impact factor: 11.025

4.  Novel p53 splicing site mutation in Li-Fraumeni-like syndrome with osteosarcoma.

Authors:  Naoto Sakurai; Shotaro Iwamoto; Yoshihiro Miura; Tomoki Nakamura; Akihiko Matsumine; Junji Nishioka; Kaname Nakatani; Yoshihiro Komada
Journal:  Pediatr Int       Date:  2013-02       Impact factor: 1.524

5.  Beyond Li Fraumeni Syndrome: clinical characteristics of families with p53 germline mutations.

Authors:  Kelly D Gonzalez; Katie A Noltner; Carolyn H Buzin; Dongqing Gu; Cindy Y Wen-Fong; Vu Q Nguyen; Jennifer H Han; Katrina Lowstuter; Jeffrey Longmate; Steve S Sommer; Jeffrey N Weitzel
Journal:  J Clin Oncol       Date:  2009-02-09       Impact factor: 44.544

Review 6.  p53 Isoforms: Key Regulators of the Cell Fate Decision.

Authors:  Sebastien M Joruiz; Jean-Christophe Bourdon
Journal:  Cold Spring Harb Perspect Med       Date:  2016-08-01       Impact factor: 6.915

7.  Germline Mutations in Predisposition Genes in Pediatric Cancer.

Authors:  Jinghui Zhang; Michael F Walsh; Gang Wu; Kim E Nichols; Michael N Edmonson; Tanja A Gruber; John Easton; Dale Hedges; Xiaotu Ma; Xin Zhou; Donald A Yergeau; Mark R Wilkinson; Bhavin Vadodaria; Xiang Chen; Rose B McGee; Stacy Hines-Dowell; Regina Nuccio; Emily Quinn; Sheila A Shurtleff; Michael Rusch; Aman Patel; Jared B Becksfort; Shuoguo Wang; Meaghann S Weaver; Li Ding; Elaine R Mardis; Richard K Wilson; Amar Gajjar; David W Ellison; Alberto S Pappo; Ching-Hon Pui; James R Downing
Journal:  N Engl J Med       Date:  2015-11-18       Impact factor: 91.245

8.  Intron 3 sixteen base pairs duplication polymorphism of p53 contributes to breast cancer susceptibility: evidence from meta-analysis.

Authors:  Dongmei Wu; Zhizhong Zhang; Haiyan Chu; Ming Xu; Yao Xue; Haixia Zhu; Zhengdong Zhang
Journal:  PLoS One       Date:  2013-04-19       Impact factor: 3.240

9.  Discovery and saturation analysis of cancer genes across 21 tumour types.

Authors:  Michael S Lawrence; Petar Stojanov; Craig H Mermel; James T Robinson; Levi A Garraway; Todd R Golub; Matthew Meyerson; Stacey B Gabriel; Eric S Lander; Gad Getz
Journal:  Nature       Date:  2014-01-05       Impact factor: 49.962

10.  Cancer risk among children born after assisted conception.

Authors:  Carrie L Williams; Kathryn J Bunch; Charles A Stiller; Michael F G Murphy; Beverley J Botting; W Hamish Wallace; Melanie Davies; Alastair G Sutcliffe
Journal:  N Engl J Med       Date:  2013-11-07       Impact factor: 91.245

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  4 in total

1.  Evidence in disease and non-disease contexts that nonsense mutations cause altered splicing via motif disruption.

Authors:  Liam Abrahams; Rosina Savisaar; Christine Mordstein; Bethan Young; Grzegorz Kudla; Laurence D Hurst
Journal:  Nucleic Acids Res       Date:  2021-09-27       Impact factor: 16.971

Review 2.  Synonymous Variants: Necessary Nuance in Our Understanding of Cancer Drivers and Treatment Outcomes.

Authors:  Nayiri M Kaissarian; Douglas Meyer; Chava Kimchi-Sarfaty
Journal:  J Natl Cancer Inst       Date:  2022-08-08       Impact factor: 11.816

3.  A study of splicing mutations in disorders of sex development.

Authors:  Flavia Leme de Calais; Lindsay D Smith; Michela Raponi; Andréa Trevas Maciel-Guerra; Gil Guerra-Junior; Maricilda Palandi de Mello; Diana Baralle
Journal:  Sci Rep       Date:  2017-11-24       Impact factor: 4.379

Review 4.  Recognition of the polycistronic nature of human genes is critical to understanding the genotype-phenotype relationship.

Authors:  Marie A Brunet; Sébastien A Levesque; Darel J Hunting; Alan A Cohen; Xavier Roucou
Journal:  Genome Res       Date:  2018-04-06       Impact factor: 9.043

  4 in total

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