Literature DB >> 28468952

Reliability of an automatic classifier for brain enlarged perivascular spaces burden and comparison with human performance.

Víctor González-Castro1, María Del C Valdés Hernández1, Francesca M Chappell2, Paul A Armitage3, Stephen Makin2, Joanna M Wardlaw2.   

Abstract

In the brain, enlarged perivascular spaces (PVS) relate to cerebral small vessel disease (SVD), poor cognition, inflammation and hypertension. We propose a fully automatic scheme that uses a support vector machine (SVM) to classify the burden of PVS in the basal ganglia (BG) region as low or high. We assess the performance of three different types of descriptors extracted from the BG region in T2-weighted MRI images: (i) statistics obtained from Wavelet transform's coefficients, (ii) local binary patterns and (iii) bag of visual words (BoW) based descriptors characterizing local keypoints obtained from a dense grid with the scale-invariant feature transform (SIFT) characteristics. When the latter were used, the SVM classifier achieved the best accuracy (81.16%). The output from the classifier using the BoW descriptors was compared with visual ratings done by an experienced neuroradiologist (Observer 1) and by a trained image analyst (Observer 2). The agreement and cross-correlation between the classifier and Observer 2 (κ = 0.67 (0.58-0.76)) were slightly higher than between the classifier and Observer 1 (κ = 0.62 (0.53-0.72)) and comparable between both the observers (κ = 0.68 (0.61-0.75)). Finally, three logistic regression models using clinical variables as independent variable and each of the PVS ratings as dependent variable were built to assess how clinically meaningful were the predictions of the classifier. The goodness-of-fit of the model for the classifier was good (area under the curve (AUC) values: 0.93 (model 1), 0.90 (model 2) and 0.92 (model 3)) and slightly better (i.e. AUC values: 0.02 units higher) than that of the model for Observer 2. These results suggest that, although it can be improved, an automatic classifier to assess PVS burden from brain MRI can provide clinically meaningful results close to those from a trained observer.
© 2017 The Author(s).

Entities:  

Keywords:  Bag of visual words; Brain MRI; Discrete Wavelet transform; Local binary patterns; Perivascular spaces; Support vector machine

Mesh:

Year:  2017        PMID: 28468952     DOI: 10.1042/CS20170051

Source DB:  PubMed          Journal:  Clin Sci (Lond)        ISSN: 0143-5221            Impact factor:   6.124


  10 in total

Review 1.  Perivascular Spaces, Glymphatic System and MR.

Authors:  Linya Yu; Xiaofei Hu; Haitao Li; Yilei Zhao
Journal:  Front Neurol       Date:  2022-05-03       Impact factor: 4.086

Review 2.  Understanding the role of the perivascular space in cerebral small vessel disease.

Authors:  Rosalind Brown; Helene Benveniste; Sandra E Black; Serge Charpak; Martin Dichgans; Anne Joutel; Maiken Nedergaard; Kenneth J Smith; Berislav V Zlokovic; Joanna M Wardlaw
Journal:  Cardiovasc Res       Date:  2018-09-01       Impact factor: 10.787

3.  Autoidentification of perivascular spaces in white matter using clinical field strength T1 and FLAIR MR imaging.

Authors:  Daniel L Schwartz; Erin L Boespflug; David L Lahna; Jeffrey Pollock; Natalie E Roese; Lisa C Silbert
Journal:  Neuroimage       Date:  2019-08-25       Impact factor: 6.556

4.  Cerebral Small Vessel Disease: A Review Focusing on Pathophysiology, Biomarkers, and Machine Learning Strategies.

Authors:  Elisa Cuadrado-Godia; Pratistha Dwivedi; Sanjiv Sharma; Angel Ois Santiago; Jaume Roquer Gonzalez; Mercedes Balcells; John Laird; Monika Turk; Harman S Suri; Andrew Nicolaides; Luca Saba; Narendra N Khanna; Jasjit S Suri
Journal:  J Stroke       Date:  2018-09-30       Impact factor: 6.967

5.  Identification of the presence of ischaemic stroke lesions by means of texture analysis on brain magnetic resonance images.

Authors:  Rafael Ortiz-Ramón; Maria Del C Valdés Hernández; Victor González-Castro; Stephen Makin; Paul A Armitage; Benjamin S Aribisala; Mark E Bastin; Ian J Deary; Joanna M Wardlaw; David Moratal
Journal:  Comput Med Imaging Graph       Date:  2019-03-16       Impact factor: 4.790

6.  Structural neuroimaging differentiates vulnerability from disease manifestation in colombian families with Huntington's disease.

Authors:  Maria Del C Valdés Hernández; Janna Abu-Hussain; Xinyi Qiu; Josef Priller; Mario Parra Rodríguez; Mariana Pino; Sandra Báez; Agustín Ibáñez
Journal:  Brain Behav       Date:  2019-07-05       Impact factor: 2.708

Review 7.  Artificial Intelligence Versus Clinicians in Disease Diagnosis: Systematic Review.

Authors:  Jiayi Shen; Casper J P Zhang; Bangsheng Jiang; Jiebin Chen; Jian Song; Zherui Liu; Zonglin He; Sum Yi Wong; Po-Han Fang; Wai-Kit Ming
Journal:  JMIR Med Inform       Date:  2019-08-16

8.  The role of brain perivascular space burden in early-stage Parkinson's disease.

Authors:  Ting Shen; Yumei Yue; Shuai Zhao; Juanjuan Xie; Yanxing Chen; Jun Tian; Wen Lv; Chun-Yi Zac Lo; Yi-Cheng Hsu; Tobias Kober; Baorong Zhang; Hsin-Yi Lai
Journal:  NPJ Parkinsons Dis       Date:  2021-02-05

9.  Altered Brain Morphometry in Cerebral Small Vessel Disease With Cerebral Microbleeds: An Investigation Combining Univariate and Multivariate Pattern Analyses.

Authors:  Jing Li; Hongwei Wen; Shengpei Wang; Yena Che; Nan Zhang; Lingfei Guo
Journal:  Front Neurol       Date:  2022-02-23       Impact factor: 4.003

Review 10.  Imaging perivascular space structure and function using brain MRI.

Authors:  Giuseppe Barisano; Kirsten M Lynch; Francesca Sibilia; Haoyu Lan; Nien-Chu Shih; Farshid Sepehrband; Jeiran Choupan
Journal:  Neuroimage       Date:  2022-05-21       Impact factor: 7.400

  10 in total

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