Literature DB >> 28467433

Correction: Meta-transcriptome Profiling of the Human-Leishmania braziliensis Cutaneous Lesion.

Stephen M Christensen, Laura A L Dillon, Lucas P Carvalho, Sara Passos, Fernanda O Novais, V Keith Hughitt, Daniel P Beiting, Edgar M Carvalho, Phillip Scott, Najib M El-Sayed, David M Mosser.   

Abstract

[This corrects the article DOI: 10.1371/journal.pntd.0004992.].

Entities:  

Year:  2017        PMID: 28467433      PMCID: PMC5415002          DOI: 10.1371/journal.pntd.0005588

Source DB:  PubMed          Journal:  PLoS Negl Trop Dis        ISSN: 1935-2727


There are errors in Table 1. A computational error caused incorrect gene length values to be applied to the parasite RPKM calculations, resulting in changes in the ranking of which parasite genes were most highly expressed by RNA sequencing. A corrected Table 1 is provided here.
Table 1

Top 20 L. braziliensis genes expressed in detectable-positive lesions as ranked by RPKM.

Gene Description (IDs)L. braziliensis RPKM
amastin-like surface protein, putative (LbrM.08.1060/08.300/08.1130)38295
L-ribulokinase, putative (LbrM.35.0100)11184
amastin-like surface protein, putative (LbrM.18.0460/08.0310/08.290)7270
histone H2B (LbrM.09.1400)6390
amastin-like surface protein, putative (LbrM.08.1100/20.4300)6164
kinesin, putative (pseudogene) (LbrM.20.1090)5013
unspecified product (LbrM.24.1400)4973
tagatose-6-phosphate kinase-like protein (LbrM.02.0030)4232
amastin-like protein (LbrM.08.1030)3867
histone H1 (LbrM.18.1510)3827
amastin-like surface protein, putative (LbrM.20.0790)3778
hypothetical protein, conserved (LbrM.20.3230)3753
amastin-like protein (LbrM.08.0670)3727
heat-shock protein hsp70, putative (LbrM.28.2990)3676
beta tubulin (LbrM.21.2150)3620
amastin-like surface protein (LbrM.18.0470)3567
histone H2A (LbrM.21.1140)3342
amastin-like surface protein, putative (LbrM.20.1080)3321
histone H2A, putative (LbrM.21.1160)3192
histone H1, putative (LbrM.27.1290)3145
  1 in total

1.  Meta-transcriptome Profiling of the Human-Leishmania braziliensis Cutaneous Lesion.

Authors:  Stephen M Christensen; Laura A L Dillon; Lucas P Carvalho; Sara Passos; Fernanda O Novais; V Keith Hughitt; Daniel P Beiting; Edgar M Carvalho; Phillip Scott; Najib M El-Sayed; David M Mosser
Journal:  PLoS Negl Trop Dis       Date:  2016-09-15
  1 in total
  1 in total

1.  Distinct plasma chemokines and cytokines signatures in Leishmania guyanensis-infected patients with cutaneous leishmaniasis.

Authors:  Tirza Gabrielle Ramos de Mesquita; José do Espírito Santo Junior; Luan Diego Oliveira da Silva; George Allan Villarouco Silva; Felipe Jules de Araújo; Suzana Kanawati Pinheiro; Herllon Karllos Athaydes Kerr; Lener Santos da Silva; Luciane Macedo de Souza; Samir Assad de Almeida; Krys Layane Guimarães Duarte Queiroz; Josué Lacerda de Souza; Cilana Chagas da Silva; Héctor David Graterol Sequera; Mara Lúcia Gomes de Souza; Anderson Nogueira Barbosa; Gemilson Soares Pontes; Marcus Vinitius de Farias Guerra; Rajendranath Ramasawmy
Journal:  Front Immunol       Date:  2022-08-25       Impact factor: 8.786

  1 in total

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