Literature DB >> 28466098

Lone pair-π interactions in biological systems: occurrence, function, and physical origin.

Jiří Kozelka1,2,3,4,5.   

Abstract

Lone pair-π interactions are now recognized as a supramolecular bond whose existence in biological systems is documented by a growing number of examples. They are commonly attributed to electrostatic forces. This review attempts to highlight some recent discoveries evidencing the important role which lone pair-π interactions, and anion-π interactions in particular, play in stabilizing the structure and affecting the function of biomolecules. Special attention is paid to studies exploring the physical origin of these at first glance counterintuitive interactions between a lone pair of electrons of one residue and the π-cloud of another. Recent theoretical work went beyond the popular electrostatic model and inquired the extent to which orbital interactions have to be taken into account. In at least one biologically relevant case-that of anion-flavin interactions-a substantial charge-transfer component has been shown to operate.

Entities:  

Keywords:  Ab initio calculations; Anion–π interactions; Donor–acceptor systems; Energy decomposition analysis; Lone pair–π interactions; π interactions

Mesh:

Year:  2017        PMID: 28466098     DOI: 10.1007/s00249-017-1210-1

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  33 in total

1.  Halide recognition through diagnostic "anion-pi" interactions: molecular complexes of Cl-, Br-, and I- with olefinic and aromatic pi receptors.

Authors:  Yaroslav S Rosokha; Sergey V Lindeman; Sergiy V Rosokha; Jay K Kochi
Journal:  Angew Chem Int Ed Engl       Date:  2004-09-06       Impact factor: 15.336

2.  The π-accepting arene HAT(CN)6 as a halide receptor through charge transfer: multisite anion interactions and self-assembly in solution and the solid state.

Authors:  Helen T Chifotides; Brandi L Schottel; Kim R Dunbar
Journal:  Angew Chem Int Ed Engl       Date:  2010-09-24       Impact factor: 15.336

3.  Relevant anion-π interactions in biological systems: the case of urate oxidase.

Authors:  Carolina Estarellas; Antonio Frontera; David Quiñonero; Pere M Deyà
Journal:  Angew Chem Int Ed Engl       Date:  2011-01-10       Impact factor: 15.336

4.  Anion-π interactions in flavoproteins.

Authors:  Carolina Estarellas; Antonio Frontera; David Quiñonero; Pere M Deyà
Journal:  Chem Asian J       Date:  2011-06-29

5.  Anion-π Interactions in Flavoproteins Involve a Substantial Charge-Transfer Component.

Authors:  Yevgen P Yurenko; Sophia Bazzi; Radek Marek; Jiří Kozelka
Journal:  Chemistry       Date:  2017-02-08       Impact factor: 5.236

6.  "η6"-Type anion-π in biomolecular recognition.

Authors:  Suvobrata Chakravarty; Zi-Zhang Sheng; Bradley Iverson; Brian Moore
Journal:  FEBS Lett       Date:  2012-10-23       Impact factor: 4.124

Review 7.  Aromatic rings in chemical and biological recognition: energetics and structures.

Authors:  Laura M Salonen; Manuel Ellermann; François Diederich
Journal:  Angew Chem Int Ed Engl       Date:  2011-04-28       Impact factor: 15.336

8.  Unconventional interactions between water and heterocyclic nitrogens in protein structures.

Authors:  Elliott J Stollar; Jose Luis Gelpí; Sameer Velankar; Adel Golovin; Modesto Orozco; Ben F Luisi
Journal:  Proteins       Date:  2004-10-01

9.  Anion-π interactions in supramolecular architectures.

Authors:  Helen T Chifotides; Kim R Dunbar
Journal:  Acc Chem Res       Date:  2013-03-11       Impact factor: 22.384

10.  Anion-arene adducts: C-H hydrogen bonding, anion-pi interaction, and carbon bonding motifs.

Authors:  Benjamin P Hay; Vyacheslav S Bryantsev
Journal:  Chem Commun (Camb)       Date:  2008-03-04       Impact factor: 6.222

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  4 in total

1.  Regional Biophysics Conference - RBC2016.

Authors:  Mauro Dalla Serra; Alessandro Tossi
Journal:  Eur Biophys J       Date:  2017-12       Impact factor: 1.733

2.  Cyclic di-AMP, a second messenger of primary importance: tertiary structures and binding mechanisms.

Authors:  Jin He; Wen Yin; Michael Y Galperin; Shan-Ho Chou
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

3.  Studies of Halogen Bonding Induced by Pentafluorosulfanyl Aryl Iodides: A Potential Group of Halogen Bond Donors in a Rational Drug Design.

Authors:  Yuji Sumii; Kenta Sasaki; Seiji Tsuzuki; Norio Shibata
Journal:  Molecules       Date:  2019-10-07       Impact factor: 4.411

4.  Lone Pair…π Contacts and Structure Signatures of r(UNCG) Tetraloops, Z-Turns, and Z-Steps: A WebFR3D Survey.

Authors:  Craig L Zirbel; Pascal Auffinger
Journal:  Molecules       Date:  2022-07-07       Impact factor: 4.927

  4 in total

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