| Literature DB >> 28466044 |
Seungmo Lim1,2, Davaajargal Igori1,2, Fumei Zhao1,2, Yun Su Do3, In-Sook Cho4, Gug-Seoun Choi4, Jae Sun Moon1,2.
Abstract
Four samples of Plantago asiatica showing mottle or mottled yellowing symptoms were collected and three of them were confirmed to be infected with Plantago asiatica mosaic virus (PlAMV) by Illumina HiSeq 2500 paired-end RNA sequencing. Consequently, the complete genomic sequence of a Korean isolate of PlAMV (PlAMV isolate Gunwi) from P. asiatica was determined. The nucleotide sequence of PlAMV-Gunwi was most closely related to a Russian isolate of PlAMV (PlAMV-Ru) collected from P. asiatica but highly dissimilar (~23 %) to other isolates of PlAMV from other plant species. Pairwise comparisons revealed that the complete replicase protein and coat protein of PlAMV-Gunwi share 85.15-91.20 and 84.54-90.82 % amino acid sequence identities, respectively, to the corresponding proteins of other PlAMV isolates. To our knowledge, this is the first report of the natural infection of P. asiatica by PlAMV in Korea, and the divergent PlAMV isolate Gunwi expands our understanding of the epidemiology of PlAMV.Entities:
Keywords: Divergent isolate; Next-generation sequencing; PlAMV; Plantago asiatica
Year: 2016 PMID： 28466044 PMCID： PMC5394712 DOI： 10.1007/s13337-016-0329-5
Source DB: PubMed Journal: Virusdisease ISSN： 2347-3584