Literature DB >> 28466034

Prediction of HBF-0259 interactions with hepatitis B Virus receptors and surface antigen secretory factors.

Alireza Mohebbi1, Saeed Mohammadi2, Ali Memarian3.   

Abstract

Hepatitis B virus (HBV) is an etiological agent of viral hepatitis, which may lead to cirrhosis, and hepatocellular carcinoma. Current treatment strategies have not shown promising effect to date but various complications such as, drug toxicity-resistance have been reported. Study on newly discovered compounds, with minimal side effects, as specific HBV inhibitors is a fundamental subject introducing new biologic drugs. Here, we aimed to, by prediction, estimate interactions of HBF-0259 as a non-toxic anti-HBV compound on inhibiting the HBV through either interaction with the viral entry or HBsAg secreting factors using In Silico procedure. Molecular docking was performed by Hex 8.0.0 software to predict the interaction energy (Etot) between HBF-0259 and known cellular factors involved in HBV entry and HBsAg secreting factors. Hex 8.0.0 also employed to create protein-protein complexes. These interactions were then used to analyze the binding site of HBF-0259 within the assumed receptors by MGLTools software. Finally, the amino acid sequences involved in this interaction were aligned for any conservancy. Here, we showed that HBF-0259 Etot with CypA (-545.41 kcal/mol) and SCCA1 (499.68 kcal/mol), involved in HBsAg secretion and HBV integration, respectively, was higher than other interactions. Furthermore, HBF-0259 predicted interaction energy was even higher than those of CypA inhibitors. In addition, we claim that preS1 and/or preS2 regions within HBsAg are not suitable targets for HBF-0259. HBF-0259 has higher interaction energy with CypA and SCCA1, even more than other known receptors, co-receptors, viral ligands, and secretory factors. HBF-0259 could be introduced as potent anti-viral compound in which CypA and or SCCA1, as previously shown, are involved.

Entities:  

Keywords:  Cyclophilin A; HBF-0259; HBV; HBsAg secretion; Interaction; Molecular docking

Year:  2016        PMID: 28466034      PMCID: PMC5394709          DOI: 10.1007/s13337-016-0333-9

Source DB:  PubMed          Journal:  Virusdisease        ISSN: 2347-3584


  42 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Structure validation by Calpha geometry: phi,psi and Cbeta deviation.

Authors:  Simon C Lovell; Ian W Davis; W Bryan Arendall; Paul I W de Bakker; J Michael Word; Michael G Prisant; Jane S Richardson; David C Richardson
Journal:  Proteins       Date:  2003-02-15

Review 3.  Hepatitis B virus infection.

Authors:  Christian Trépo; Henry L Y Chan; Anna Lok
Journal:  Lancet       Date:  2014-06-18       Impact factor: 79.321

4.  Fibronectin and asialoglyprotein receptor mediate hepatitis B surface antigen binding to the cell surface.

Authors:  Jing Yang; Feng Wang; Linlin Tian; Jing Su; Xiangqian Zhu; Li Lin; Xiaoran Ding; Xuejun Wang; Shengqi Wang
Journal:  Arch Virol       Date:  2010-04-03       Impact factor: 2.574

5.  Modulation of hepatitis B surface antigen secretion by annexin II expressed in hepatitis B virus‑producing hepatoma cells.

Authors:  Yaming Liu; Pujun Gao
Journal:  Mol Med Rep       Date:  2014-09-30       Impact factor: 2.952

6.  Design, synthesis, and biological evaluation of triazolo-pyrimidine derivatives as novel inhibitors of hepatitis B virus surface antigen (HBsAg) secretion.

Authors:  Wenquan Yu; Cally Goddard; Elizabeth Clearfield; Courtney Mills; Tong Xiao; Haitao Guo; John D Morrey; Neil E Motter; Kang Zhao; Timothy M Block; Andrea Cuconati; Xiaodong Xu
Journal:  J Med Chem       Date:  2011-08-02       Impact factor: 7.446

7.  [Determination of enzymatic catalysis for the cis-trans-isomerization of peptide binding in proline-containing peptides].

Authors:  G Fischer; H Bang; C Mech
Journal:  Biomed Biochim Acta       Date:  1984

8.  HBV life cycle: entry and morphogenesis.

Authors:  Stephanie Schädler; Eberhard Hildt
Journal:  Viruses       Date:  2009-09-01       Impact factor: 5.048

Review 9.  Targeting cell entry of enveloped viruses as an antiviral strategy.

Authors:  Elodie Teissier; François Penin; Eve-Isabelle Pécheur
Journal:  Molecules       Date:  2010-12-30       Impact factor: 4.411

10.  Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus.

Authors:  Huan Yan; Guocai Zhong; Guangwei Xu; Wenhui He; Zhiyi Jing; Zhenchao Gao; Yi Huang; Yonghe Qi; Bo Peng; Haimin Wang; Liran Fu; Mei Song; Pan Chen; Wenqing Gao; Bijie Ren; Yinyan Sun; Tao Cai; Xiaofeng Feng; Jianhua Sui; Wenhui Li
Journal:  Elife       Date:  2012-11-13       Impact factor: 8.140

View more
  4 in total

1.  Hepatitis B virus reverse transcriptase polymorphisms between treated and treatment-naïve chronically infected patients.

Authors:  Masoumeh Rezanezhadi; Alireza Mohebbi; Fatemeh Sana Askari; Seyyede Delafruz Hosseini; Alijan Tabarraei
Journal:  Virusdisease       Date:  2019-01-10

2.  P. Ala278Val mutation might cause a pathogenic defect in HEXB folding leading to the Sandhoff disease.

Authors:  Zahra Rahmani; Arsham Banisadr; Vadieh Ghodsinezhad; Mohsen Dibaj; Omid Aryani
Journal:  Metab Brain Dis       Date:  2022-10-03       Impact factor: 3.655

Review 3.  An Overview of Hepatitis B Virus Surface Antigen Secretion Inhibitors.

Authors:  Alireza Mohebbi; Nazanin Lorestani; Alireza Tahamtan; Niki L Kargar; Alijan Tabarraei
Journal:  Front Microbiol       Date:  2018-04-05       Impact factor: 5.640

4.  Digging for the discovery of SARS-CoV-2 nsp12 inhibitors: a pharmacophore-based and molecular dynamics simulation study.

Authors:  Fatemeh Sana Askari; Mohsen Ebrahimi; Jabbar Parhiz; Mina Hassanpour; Alireza Mohebbi; Abbas Mirshafiey
Journal:  Future Virol       Date:  2022-08-08       Impact factor: 3.015

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.