Literature DB >> 28463453

A simple answer to complex questions: Caenorhabditis elegans as an experimental model for examining the DNA damage response and disease genes.

Matthias Rieckher1, Arturo Bujarrabal1, Markus A Doll1, Najmeh Soltanmohammadi1, Björn Schumacher1.   

Abstract

The genetic information is constantly challenged by genotoxic attacks. DNA repair mechanisms evolved early in evolution and recognize and remove the various lesions. A complex network of DNA damage responses (DDR) orchestrates a variety of physiological adaptations to the presence of genome instability. Erroneous repair or malfunctioning of the DDR causes cancer development and the accumulation of DNA lesions drives the aging process. For understanding the complex DNA repair and DDR mechanisms it is pivotal to employ simple metazoan as model systems. The nematode Caenorhabditis elegans has become a well-established and popular experimental organism that allows dissecting genome stability mechanisms in dynamic and differentiated tissues and under physiological conditions. We provide an overview of the distinct advantages of the nematode system for studying DDR and provide a range of currently applied methodologies.
© 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  C. elegans; DNA damage response; DNA repair; aging; genome stability

Mesh:

Year:  2017        PMID: 28463453      PMCID: PMC5562273          DOI: 10.1002/jcp.25979

Source DB:  PubMed          Journal:  J Cell Physiol        ISSN: 0021-9541            Impact factor:   6.384


  42 in total

1.  Ageing: when less is more.

Authors:  Adam Antebi
Journal:  Nature       Date:  2007-05-31       Impact factor: 49.962

2.  Longevity through DNA damage tolerance.

Authors:  Laia Castells-Roca; Michael M Mueller; Björn Schumacher
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

Review 3.  Nucleotide excision repair: new tricks with old bricks.

Authors:  Irene Kamileri; Ismene Karakasilioti; George A Garinis
Journal:  Trends Genet       Date:  2012-07-22       Impact factor: 11.639

4.  CED-1 is a transmembrane receptor that mediates cell corpse engulfment in C. elegans.

Authors:  Z Zhou; E Hartwieg; H R Horvitz
Journal:  Cell       Date:  2001-01-12       Impact factor: 41.582

5.  A new progeroid syndrome reveals that genotoxic stress suppresses the somatotroph axis.

Authors:  Laura J Niedernhofer; George A Garinis; Anja Raams; Astrid S Lalai; Andria Rasile Robinson; Esther Appeldoorn; Hanny Odijk; Roos Oostendorp; Anwaar Ahmad; Wibeke van Leeuwen; Arjan F Theil; Wim Vermeulen; Gijsbertus T J van der Horst; Peter Meinecke; Wim J Kleijer; Jan Vijg; Nicolaas G J Jaspers; Jan H J Hoeijmakers
Journal:  Nature       Date:  2006-12-21       Impact factor: 49.962

Review 6.  Methods for studying the DNA damage response in the Caenorhabdatis elegans germ line.

Authors:  Ashley L Craig; Sandra C Moser; Aymeric P Bailly; Anton Gartner
Journal:  Methods Cell Biol       Date:  2012       Impact factor: 1.441

7.  Lethality induced by a single site-specific double-strand break in a dispensable yeast plasmid.

Authors:  C B Bennett; A L Lewis; K K Baldwin; M A Resnick
Journal:  Proc Natl Acad Sci U S A       Date:  1993-06-15       Impact factor: 11.205

8.  Polymerase theta-mediated end joining of replication-associated DNA breaks in C. elegans.

Authors:  Sophie F Roerink; Robin van Schendel; Marcel Tijsterman
Journal:  Genome Res       Date:  2014-03-10       Impact factor: 9.043

9.  Persistent transcription-blocking DNA lesions trigger somatic growth attenuation associated with longevity.

Authors:  George A Garinis; Lieneke M Uittenboogaard; Heike Stachelscheid; Maria Fousteri; Wilfred van Ijcken; Timo M Breit; Harry van Steeg; Leon H F Mullenders; Gijsbertus T J van der Horst; Jens C Brüning; Carien M Niessen; Jan H J Hoeijmakers; Björn Schumacher
Journal:  Nat Cell Biol       Date:  2009-04-12       Impact factor: 28.824

10.  A role for the malignant brain tumour (MBT) domain protein LIN-61 in DNA double-strand break repair by homologous recombination.

Authors:  Nicholas M Johnson; Bennie B L G Lemmens; Marcel Tijsterman
Journal:  PLoS Genet       Date:  2013-03-07       Impact factor: 5.917

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  11 in total

Review 1.  Caenorhabditis elegans as an emerging model system in environmental epigenetics.

Authors:  Caren Weinhouse; Lisa Truong; Joel N Meyer; Patrick Allard
Journal:  Environ Mol Mutagen       Date:  2018-08-09       Impact factor: 3.216

2.  Nucleotide Excision Repair, XPA-1, and the Translesion Synthesis Complex, POLZ-1 and REV-1, Are Critical for Interstrand Cross-Link Repair in Caenorhabditis elegans Germ Cells.

Authors:  Sinae Oh; Woori Bae; Mohammad A Alfhili; Myon Hee Lee
Journal:  Biochemistry       Date:  2020-09-18       Impact factor: 3.162

Review 3.  C. elegans as an Animal Model to Study the Intersection of DNA Repair, Aging and Neurodegeneration.

Authors:  Francisco José Naranjo-Galindo; Ruixue Ai; Evandro Fei Fang; Hilde Loge Nilsen; Tanima SenGupta
Journal:  Front Aging       Date:  2022-06-22

4.  MPK-1/ERK pathway regulates DNA damage response during development through DAF-16/FOXO.

Authors:  Julien N Bianco; Björn Schumacher
Journal:  Nucleic Acids Res       Date:  2018-07-06       Impact factor: 16.971

5.  Effects of Orange Extracts on Longevity, Healthspan, and Stress Resistance in Caenorhabditis elegans.

Authors:  Jing Wang; Na Deng; Hong Wang; Tong Li; Ling Chen; Bisheng Zheng; Rui Hai Liu
Journal:  Molecules       Date:  2020-01-15       Impact factor: 4.411

Review 6.  DNA damage responses in ageing.

Authors:  Paulo F L da Silva; Björn Schumacher
Journal:  Open Biol       Date:  2019-11-20       Impact factor: 6.411

7.  Dietary and environmental factors have opposite AhR-dependent effects on C. elegans healthspan.

Authors:  Vanessa Brinkmann; Alfonso Schiavi; Anjumara Shaik; Daniel Rüdiger Puchta; Natascia Ventura
Journal:  Aging (Albany NY)       Date:  2020-12-13       Impact factor: 5.682

8.  C. elegans TFIIH subunit GTF-2H5/TTDA is a non-essential transcription factor indispensable for DNA repair.

Authors:  Karen L Thijssen; Melanie van der Woude; Carlota Davó-Martínez; Dick H W Dekkers; Mariangela Sabatella; Jeroen A A Demmers; Wim Vermeulen; Hannes Lans
Journal:  Commun Biol       Date:  2021-11-25

Review 9.  Xenobiotic metabolism and transport in Caenorhabditis elegans.

Authors:  Jessica H Hartman; Samuel J Widmayer; Christina M Bergemann; Dillon E King; Katherine S Morton; Riccardo F Romersi; Laura E Jameson; Maxwell C K Leung; Erik C Andersen; Stefan Taubert; Joel N Meyer
Journal:  J Toxicol Environ Health B Crit Rev       Date:  2021-02-22       Impact factor: 8.071

Review 10.  DNA Damage Responses during the Cell Cycle: Insights from Model Organisms and Beyond.

Authors:  Delisa E Clay; Donald T Fox
Journal:  Genes (Basel)       Date:  2021-11-25       Impact factor: 4.096

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