Literature DB >> 28462731

Constructing Ebola transmission chains from West Africa and estimating model parameters using internet sources.

W B P Pettey1,2, M E Carter1,2, D J A Toth1,3, M H Samore1,2, A V Gundlapalli1,2.   

Abstract

During the recent Ebola crisis in West Africa, individual person-level details of disease onset, transmissions, and outcomes such as survival or death were reported in online news media. We set out to document disease transmission chains for Ebola, with the goal of generating a timely account that could be used for surveillance, mathematical modeling, and public health decision-making. By accessing public web pages only, such as locally produced newspapers and blogs, we created a transmission chain involving two Ebola clusters in West Africa that compared favorably with other published transmission chains, and derived parameters for a mathematical model of Ebola disease transmission that were not statistically different from those derived from published sources. We present a protocol for responsibly gleaning epidemiological facts, transmission model parameters, and useful details from affected communities using mostly indigenously produced sources. After comparing our transmission parameters to published parameters, we discuss additional benefits of our method, such as gaining practical information about the affected community, its infrastructure, politics, and culture. We also briefly compare our method to similar efforts that used mostly non-indigenous online sources to generate epidemiological information.

Entities:  

Keywords:  Disease transmission modeling; Ebola virus

Mesh:

Year:  2017        PMID: 28462731      PMCID: PMC5830111          DOI: 10.1017/S0950268817000760

Source DB:  PubMed          Journal:  Epidemiol Infect        ISSN: 0950-2688            Impact factor:   2.451


  18 in total

1.  Transmission dynamics and control of severe acute respiratory syndrome.

Authors:  Marc Lipsitch; Ted Cohen; Ben Cooper; James M Robins; Stefan Ma; Lyn James; Gowri Gopalakrishna; Suok Kai Chew; Chorh Chuan Tan; Matthew H Samore; David Fisman; Megan Murray
Journal:  Science       Date:  2003-05-23       Impact factor: 47.728

2.  Characterizing Ebola Transmission Patterns Based on Internet News Reports.

Authors:  Julie M Cleaton; Cecile Viboud; Lone Simonsen; Ana M Hurtado; Gerardo Chowell
Journal:  Clin Infect Dis       Date:  2015-09-03       Impact factor: 9.079

3.  Estimating incubation period distributions with coarse data.

Authors:  Nicholas G Reich; Justin Lessler; Derek A T Cummings; Ron Brookmeyer
Journal:  Stat Med       Date:  2009-09-30       Impact factor: 2.373

4.  Ethical issues in health research with novel online sources.

Authors:  Effy Vayena; Anna Mastroianni; Jeffrey Kahn
Journal:  Am J Public Health       Date:  2012-10-18       Impact factor: 9.308

5.  West African Ebola epidemic after one year--slowing but not yet under control.

Authors:  Junerlyn Agua-Agum; Archchun Ariyarajah; Bruce Aylward; Isobel M Blake; Richard Brennan; Anne Cori; Christl A Donnelly; Ilaria Dorigatti; Christopher Dye; Tim Eckmanns; Neil M Ferguson; Pierre Formenty; Christophe Fraser; Erika Garcia; Tini Garske; Wes Hinsley; David Holmes; Stéphane Hugonnet; Swathi Iyengar; Thibaut Jombart; Ravi Krishnan; Sascha Meijers; Harriet L Mills; Yasmine Mohamed; Gemma Nedjati-Gilani; Emily Newton; Pierre Nouvellet; Louise Pelletier; Devin Perkins; Steven Riley; Maria Sagrado; Johannes Schnitzler; Dirk Schumacher; Anita Shah; Maria D Van Kerkhove; Olivia Varsaneux; Niluka Wijekoon Kannangarage
Journal:  N Engl J Med       Date:  2014-12-24       Impact factor: 91.245

6.  Estimation of MERS-Coronavirus Reproductive Number and Case Fatality Rate for the Spring 2014 Saudi Arabia Outbreak: Insights from Publicly Available Data.

Authors:  Maimuna S Majumder; Caitlin Rivers; Eric Lofgren; David Fisman
Journal:  PLoS Curr       Date:  2014-12-18

7.  A review of epidemiological parameters from Ebola outbreaks to inform early public health decision-making.

Authors:  Maria D Van Kerkhove; Ana I Bento; Harriet L Mills; Neil M Ferguson; Christl A Donnelly
Journal:  Sci Data       Date:  2015-05-26       Impact factor: 6.444

8.  Ebola virus disease outbreak - Nigeria, July-September 2014.

Authors:  Faisal Shuaib; Rajni Gunnala; Emmanuel O Musa; Frank J Mahoney; Olukayode Oguntimehin; Patrick M Nguku; Sara Beysolow Nyanti; Nancy Knight; Nasir Sani Gwarzo; Oni Idigbe; Abdulsalam Nasidi; John F Vertefeuille
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2014-10-03       Impact factor: 17.586

Review 9.  Elucidating Transmission Patterns From Internet Reports: Ebola and Middle East Respiratory Syndrome as Case Studies.

Authors:  Gerardo Chowell; Julie M Cleaton; Cecile Viboud
Journal:  J Infect Dis       Date:  2016-12-01       Impact factor: 5.226

10.  Ebola Virus Epidemiology and Evolution in Nigeria.

Authors:  Onikepe A Folarin; Deborah Ehichioya; Stephen F Schaffner; Sarah M Winnicki; Shirlee Wohl; Philomena Eromon; Kendra L West; Adrianne Gladden-Young; Nicholas E Oyejide; Christian B Matranga; Awa Bineta Deme; Ayorinde James; Christopher Tomkins-Tinch; Kenneth Onyewurunwa; Jason T Ladner; Gustavo Palacios; Iguosadolo Nosamiefan; Kristian G Andersen; Sunday Omilabu; Daniel J Park; Nathan L Yozwiak; Abdusallam Nasidi; Robert F Garry; Oyewale Tomori; Pardis C Sabeti; Christian T Happi
Journal:  J Infect Dis       Date:  2016-07-04       Impact factor: 5.226

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  1 in total

Review 1.  Precision Global Health - The case of Ebola: a scoping review.

Authors:  Nefti-Eboni Bempong; Rafael Ruiz De Castañeda; Stefanie Schütte; Isabelle Bolon; Olivia Keiser; Gérard Escher; Antoine Flahault
Journal:  J Glob Health       Date:  2019-06       Impact factor: 4.413

  1 in total

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