Literature DB >> 28461730

Genetic and phytochemical diversity analysis in Bunium persicum populations of north-western Himalaya.

Rakesh Kumar Chahota1, Vikas Sharma1,2, Minerva Ghani1, Tilak Raj Sharma1, Jai Chand Rana3, Shyam Kumar Sharma4.   

Abstract

The present study explores morphological, genetic and phytochemical composition of Bunium persicum populations belonging to high altitudinal areas of Indian Himalayan region. In total, 23 morphological traits (13 quantitative and 10 qualitative traits) and 32 Random Amplified Polymorphic DNA primers were employed to infer the population structure of the species. Of the fourteen populations, five genetically diverse populations were analyzed for phytochemical diversity. Among morphological traits, inflorescence, seed and branch traits were most significant in detecting variation. At molecular level, primers TIBMBA-06 and OPR-16 were found most polymorphic with respect to Polymorphism Information Content and Marker Index values. Dendrogram grouped all populations into two major clusters while population from Shong region out grouped separately showing its distantness from all other populations. STRUCTURE analysis was done by using Bayesian model, which characterised all populations into four clusters and some degree of admixture was also observed within individuals. Shong population showed distinct genetic makeup as also suggested by dendrogram. Phytochemical analysis showed the presence of 55 components, of which, 2-methyl-3-phenyl propanal, benzeneacetic acid, 1-phellandrene, γ-terpene, α-terpinolene, Δ0.3-carene and sabinene were major components in its essential oils. The present study revealed high genetic and phytochemical diversity in B. persicum accessions from north-western Himalayan regions. Specifically, accessions from Saptal regions were having higher quantity of essential oils and can be selected for cultivation to meet the commercial demand to some extent. Further, the diversity information provided herein can be useful in management and improvement of this species through future breeding programmes.

Entities:  

Keywords:  Bunium persicum; GC–MS technique; Genetic structure; Morphological traits; Phytochemicals; RAPD markers

Year:  2017        PMID: 28461730      PMCID: PMC5391360          DOI: 10.1007/s12298-017-0428-9

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


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4.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

5.  Antioxidant activity and chemical characterization of essential oil of Bunium persicum.

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Journal:  Plant Foods Hum Nutr       Date:  2008-12       Impact factor: 3.921

6.  Supercritical carbon dioxide extraction of essential oils from Perovskia atriplicifolia Benth.

Authors:  Seied Mahdi Pourmortazavi; Fatemeh Sefidkon; Seied Ghorban Hosseini
Journal:  J Agric Food Chem       Date:  2003-08-27       Impact factor: 5.279

7.  Antifungal effects of volatile compounds from black zira (Bunium persicum) and other spices and herbs.

Authors:  Takayuki Sekine; Mami Sugano; Azizi Majid; Yoshiharu Fujii
Journal:  J Chem Ecol       Date:  2007-10-12       Impact factor: 2.626

8.  Inference of population structure using multilocus genotype data: dominant markers and null alleles.

Authors:  Daniel Falush; Matthew Stephens; Jonathan K Pritchard
Journal:  Mol Ecol Notes       Date:  2007-07-01
  8 in total
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Journal:  3 Biotech       Date:  2018-06-02       Impact factor: 2.406

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Review 3.  Nanoparticles-Attractive Carriers of Antimicrobial Essential Oils.

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