Literature DB >> 2846040

Cytochrome c peroxidase mutant active site structures probed by resonance Raman and infrared signatures of the CO adducts.

G Smulevich1, J M Mauro, L A Fishel, A M English, J Kraut, T G Spiro.   

Abstract

Vibrational frequencies associated with FeC and CO stretching and FeCO bending modes have been determined via resonance Raman (RR) and infrared (IR) spectroscopy for cytochrome c peroxidase (CCP) mutants prepared by site-directed mutagenesis. These include the bacterial "wild type", CCP(MI), and mutations involving groups on the proximal (Asp-235----Asn; Trp-191---Phe) and distal (Trp-51----Phe; Arg-48----Leu and Lys) side of the heme. The data were analyzed with the aid of a recently established correlation between nu FeC and nu CO, which can be used to distinguish between back-bonding and axial ligand donor effects. At high pH all adducts showed essentially the same vibrational pattern (form I') with nu FeC approximately 505 cm-1, nu CO approximately 1948 cm-1, and delta FeCO (weak RR band) approximately 576 cm-1. These frequencies are very similar to those shown by the myoglobin CO adduct and imply a "normal" H-bond of the proximal histidine. At pH 7 (pH 6 for Asn-235 and Leu-48), different forms are seen for different proteins: form I (nu FeC approximately 500 cm-1, nu CO = 1922-1941 cm-1, and delta FeCO approximately 580 cm-1, very weak) in the case of CCP(MI) and Phe-191, as well as bakers' yeast CCP, or form II (nu FeC approximately 530 cm-1, nu CO = 1922-1933 cm-1, and delta FeCO = 585 cm-1, moderately strong) for Asn-235 and Phe-51.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1988        PMID: 2846040     DOI: 10.1021/bi00415a015

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

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2.  Heme Binding by Corynebacterium diphtheriae HmuT: Function and Heme Environment.

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3.  Chloride binding proteins: mechanistic implications for the oxygen-evolving complex of Photosystem II.

Authors:  W J Coleman
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4.  How active-site protonation state influences the reactivity and ligation of the heme in chlorite dismutase.

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Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

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6.  The quantum mixed-spin heme state of barley peroxidase: A paradigm for class III peroxidases.

Authors:  B D Howes; C B Schiodt; K G Welinder; M P Marzocchi; J G Ma; J Zhang; J A Shelnutt; G Smulevich
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7.  Corynebacterium diphtheriae HmuT: dissecting the roles of conserved residues in heme pocket stabilization.

Authors:  Elizabeth B Draganova; Seth A Adrian; Gudrun S Lukat-Rodgers; Cyrianne S Keutcha; Michael P Schmitt; Kenton R Rodgers; Dabney W Dixon
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8.  Effects of crystallization on the heme-carbon monoxide moiety of bovine heart cytochrome c oxidase carbonyl.

Authors:  M Tsubaki; K Shinzawa; S Yoshikawa
Journal:  Biophys J       Date:  1992-12       Impact factor: 4.033

9.  Resonance Raman spectroscopy of cytochrome c peroxidase variants that mimic manganese peroxidase.

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10.  DFT analysis of axial and equatorial effects on heme-CO vibrational modes: applications to CooA and H-NOX heme sensor proteins.

Authors:  Changliang Xu; Mohammed Ibrahim; Thomas G Spiro
Journal:  Biochemistry       Date:  2008-01-25       Impact factor: 3.162

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